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Os12g0618400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0316) R2 : 0.0166
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.185 (0.0665) R2dN8 : 0.0214 R2N8 : 0.0166
σ : 0.595
deviance : 162.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
135.4 0.547 11.1 -1.13 0.305 -0.0374 0.867 -2.11 -0.043 19.4 20 2803 -- --
139.2 0.55 11.1 -0.932 0.29 0.768 0.98 -- 0.0291 19.4 16.3 6263 -- --
137.33 0.546 11.1 -1.14 0.305 -0.0308 -- -2.12 -0.0386 19.1 19.9 2782 -- --
141.05 0.553 11.1 -1.12 0.297 0.734 -- -- -0.00716 18.9 16.37 14269 -- --
142.35 0.556 11.1 -1.14 -- -0.0445 -- -2.14 -0.0413 -- 19.8 2770 -- --
144.67 0.564 11 -0.606 0.298 -- 0.984 -- 0.117 19.4 -- -- -- --
147.29 0.568 11 -0.627 0.3 -- -- -- 0.12 19.2 -- -- -- --
145.7 0.562 11.1 -1.14 -- 0.708 -- -- -0.0401 -- 16.8 14928 -- --
154.23 0.578 11 -- 0.277 -0.337 -- -- 0.264 18.3 17.3 33074 -- --
152.06 0.576 11 -0.633 -- -- -- -- 0.114 -- -- -- -- --
157.66 0.587 11 -- 0.307 -- -- -- 0.189 19.1 -- -- -- --
156.75 0.583 11 -- -- -0.355 -- -- 0.306 -- 21.72 47520 -- --
162.61 0.595 11 -- -- -- -- -- 0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 131.51 wind 3 4320 > th dose independent rect. 8 1
2 131.64 wind 3 4320 < th dose independent rect. 8 1
3 132.16 radiation 20 1440 < th dose independent rect. 11 2
4 132.19 radiation 20 1440 < th dose dependent rect. 11 2
5 132.28 temperature 20 4320 > th dose independent rect. 19 4
15 132.88 wind 1 4320 > th dose dependent rect. 8 1
16 132.90 wind 5 4320 < th dose dependent rect. 8 1
17 132.91 temperature 20 4320 < th dose independent rect. 20 3
48 133.41 radiation 1 1440 < th dose independent rect. 13 1
50 133.41 radiation 1 1440 < th dose dependent rect. 13 1
54 133.47 radiation 1 1440 > th dose independent rect. 13 1
59 133.52 radiation 20 4320 > th dose dependent rect. 16 16
65 133.58 radiation 10 4320 > th dose independent rect. 17 14
93 133.80 wind 1 4320 > th dose independent rect. 5 1
97 133.84 humidity 90 4320 > th dose independent rect. 5 2
98 133.84 radiation 10 1440 > th dose independent rect. 11 2
99 133.84 temperature 10 43200 > th dose independent rect. 10 5
115 134.00 radiation 10 4320 > th dose dependent rect. 17 13
120 134.06 wind 1 4320 < th dose independent rect. 5 1
133 134.14 wind 5 4320 < th dose independent rect. 6 4
138 134.17 temperature 20 4320 > th dose independent sin 17 NA
143 134.21 wind 5 4320 > th dose independent rect. 6 4
144 134.22 temperature 10 43200 > th dose independent rect. 10 1
152 134.28 temperature 10 43200 > th dose independent rect. 10 3
161 134.32 humidity 90 4320 > th dose dependent rect. 5 2
167 134.36 wind 9 14400 > th dose independent rect. 20 14
189 134.48 wind 9 14400 < th dose independent rect. 20 14
190 134.48 radiation 10 4320 > th dose dependent rect. 17 1
210 134.51 temperature 20 4320 < th dose independent sin 17 NA
213 134.52 wind 9 14400 > th dose independent rect. 20 9
220 134.55 wind 9 14400 > th dose dependent rect. 20 14
231 134.61 wind 9 14400 < th dose independent rect. 20 11
253 134.72 wind 9 14400 > th dose dependent rect. 18 16
263 134.76 wind 9 14400 > th dose dependent rect. 20 10
272 134.78 wind 9 14400 > th dose dependent rect. 18 14
276 134.79 wind 9 14400 > th dose dependent rect. 18 12
286 134.83 humidity 70 90 < th dose independent sin 12 NA
287 134.83 wind 7 14400 > th dose independent rect. 21 1
300 134.88 radiation 20 4320 > th dose independent rect. 16 16
305 134.90 wind 9 14400 > th dose independent rect. 18 16
306 134.90 wind 9 14400 < th dose independent rect. 18 16
311 134.91 wind 9 14400 > th dose independent rect. 18 14
321 134.94 wind 9 14400 < th dose independent rect. 18 13
329 134.96 wind 7 14400 < th dose independent rect. 21 1
340 134.99 wind 9 14400 > th dose independent rect. 20 4
347 135.02 wind 9 14400 > th dose independent rect. 20 6
366 135.08 humidity 50 43200 < th dose dependent rect. 8 1
385 135.14 wind 9 14400 < th dose independent rect. 20 4
390 135.14 wind 7 14400 > th dose dependent rect. 20 4
405 135.18 radiation 1 1440 > th dose independent rect. 8 6
409 135.19 humidity 70 30 < th dose independent rect. 19 13
416 135.21 radiation 20 1440 < th dose independent rect. 8 6
423 135.22 wind 5 14400 > th dose dependent rect. 21 1
429 135.23 wind 9 14400 > th dose dependent sin 9 NA
431 135.23 wind 9 14400 > th dose dependent rect. 20 17
448 135.29 wind 9 14400 > th dose dependent rect. 18 19
464 135.32 wind 9 14400 > th dose dependent rect. 18 4
472 135.33 humidity 70 30 < th dose dependent rect. 19 13
479 135.34 wind 9 14400 > th dose dependent rect. 18 6
483 135.35 wind 9 14400 > th dose dependent rect. 18 8
486 135.37 wind 9 14400 > th dose independent rect. 18 6
495 135.40 wind 7 14400 < th dose independent rect. 22 3
496 135.40 radiation 20 4320 < th dose independent rect. 17 3
503 135.41 wind 9 14400 > th dose independent rect. 18 8
510 135.42 wind 7 14400 > th dose independent rect. 22 3
522 135.45 wind 9 14400 < th dose independent rect. 18 4
528 135.46 wind 9 14400 < th dose independent rect. 18 6
536 135.47 humidity 90 14400 < th dose independent rect. 6 1
539 135.47 humidity 90 4320 < th dose independent rect. 4 3
552 135.49 humidity 70 90 < th dose independent rect. 15 17
569 135.53 humidity 90 4320 < th dose independent rect. 2 6
602 135.57 wind 1 30 > th dose dependent rect. 1 13
603 135.57 atmosphere 995 43200 < th dose dependent rect. 11 19
607 135.58 temperature 20 270 > th dose independent rect. 10 20
610 135.59 wind 7 14400 > th dose independent rect. 6 1
638 135.63 humidity 90 4320 > th dose independent rect. 24 18
643 135.64 wind 3 30 > th dose independent rect. 24 12
648 135.65 wind 9 14400 > th dose independent sin 9 NA
662 135.67 wind 7 14400 < th dose independent rect. 6 1
698 135.70 radiation 20 1440 < th dose independent rect. 21 17
708 135.71 humidity 90 4320 < th dose independent rect. 24 9
711 135.71 radiation 20 1440 < th dose independent rect. 2 12
728 135.72 radiation 10 4320 > th dose dependent rect. 6 1
730 135.73 wind 9 14400 > th dose independent rect. 18 1
739 135.75 wind 9 14400 < th dose independent sin 10 NA
745 135.75 radiation 1 10 > th dose dependent rect. 16 16
795 135.82 humidity 90 4320 > th dose dependent rect. 3 14
818 135.85 atmosphere 995 43200 < th dose dependent rect. 12 15
864 135.90 wind 9 14400 < th dose independent rect. 18 1
865 135.90 humidity 90 4320 > th dose independent rect. 1 7
867 135.90 humidity 90 4320 < th dose independent rect. 23 18
872 135.91 wind 5 14400 > th dose independent sin 5 NA
882 135.92 atmosphere 995 43200 < th dose independent rect. 21 18
885 135.92 temperature 15 4320 > th dose dependent rect. 20 1
902 135.94 radiation 30 4320 > th dose independent rect. 7 1
927 135.95 wind 5 14400 > th dose independent rect. 2 10
932 135.95 humidity 50 14400 > th dose dependent rect. 5 2
938 135.95 wind 9 14400 > th dose dependent rect. 15 20
939 135.96 wind 1 14400 > th dose independent rect. 24 2
961 135.98 atmosphere 995 43200 > th dose independent rect. 18 20
963 135.98 humidity 90 4320 > th dose dependent rect. 4 10
965 135.99 wind 5 14400 < th dose independent sin 5 NA
979 136.00 wind 5 14400 < th dose independent rect. 2 10
980 136.00 wind 3 30 > th dose independent rect. 24 14