Os12g0616800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0616800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.51 | 0.419 | 11.7 | 0.211 | 0.981 | 1.2 | -1.22 | -3.79 | -0.28 | 10.7 | 26.92 | 611 | -- | -- |
| 81.99 | 0.422 | 11.6 | 0.695 | 0.943 | 0.847 | -1.02 | -- | -0.184 | 10.8 | 27.1 | 595 | -- | -- |
| 85.33 | 0.43 | 11.7 | 0.276 | 0.972 | 1.14 | -- | -3.04 | -0.248 | 10.9 | 27.3 | 600 | -- | -- |
| 86.03 | 0.432 | 11.6 | 0.599 | 0.98 | 0.82 | -- | -- | -0.211 | 11 | 26.4 | 611 | -- | -- |
| 135.49 | 0.542 | 11.7 | 0.372 | -- | 0.958 | -- | -2.87 | -0.239 | -- | 27.39 | 324 | -- | -- |
| 93.94 | 0.454 | 11.6 | 0.781 | 0.875 | -- | -1.05 | -- | -0.188 | 12 | -- | -- | -- | -- |
| 98.49 | 0.465 | 11.6 | 0.741 | 0.882 | -- | -- | -- | -0.191 | 12.3 | -- | -- | -- | -- |
| 135.61 | 0.542 | 11.6 | 0.619 | -- | 0.687 | -- | -- | -0.217 | -- | 26.3 | 247 | -- | -- |
| 94.98 | 0.454 | 11.6 | -- | 1 | 0.959 | -- | -- | -0.283 | 10.8 | 26.17 | 643 | -- | -- |
| 147.35 | 0.567 | 11.6 | 0.712 | -- | -- | -- | -- | -0.205 | -- | -- | -- | -- | -- |
| 112.96 | 0.497 | 11.6 | -- | 0.871 | -- | -- | -- | -0.274 | 12.3 | -- | -- | -- | -- |
| 145.88 | 0.563 | 11.6 | -- | -- | 0.745 | -- | -- | -0.242 | -- | 26.4 | 247 | -- | -- |
| 160.71 | 0.592 | 11.7 | -- | -- | -- | -- | -- | -0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.05 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 2 | 68.41 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 3 | 68.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 4 | 68.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 5 | 68.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 6 | 68.74 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 7 | 68.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 8 | 68.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 9 | 68.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 10 | 68.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 11 | 68.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 16 | 68.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 17 | 68.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 18 | 68.78 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 23 | 68.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 37 | 69.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 38 | 69.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 42 | 69.27 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 45 | 69.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 47 | 69.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 53 | 69.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 81 | 69.72 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 84 | 69.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 95 | 70.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 138 | 70.40 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 139 | 70.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 153 | 70.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 158 | 70.70 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 160 | 70.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 165 | 70.84 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 166 | 70.84 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 180 | 71.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 189 | 71.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 192 | 71.22 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 208 | 71.43 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 234 | 71.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 235 | 71.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 242 | 71.79 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 243 | 71.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 254 | 71.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 256 | 71.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 278 | 71.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 307 | 72.14 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 308 | 72.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 310 | 72.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 315 | 72.19 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 351 | 72.40 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 366 | 72.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 368 | 72.51 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 390 | 72.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 393 | 72.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 402 | 72.69 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 407 | 72.73 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 412 | 72.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 413 | 72.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 415 | 72.74 | radiation | 1.0 | 270 | < th | dose dependent | sin | 17 | NA |
| 423 | 72.77 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 475 | 72.86 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 489 | 72.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 503 | 72.97 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 517 | 73.03 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 569 | 73.19 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 9 |
| 573 | 73.24 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 596 | 73.34 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 655 | 73.54 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 6 |
| 696 | 73.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 700 | 73.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 725 | 73.68 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 961 | 74.02 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 974 | 74.08 | radiation | 1.0 | 270 | < th | dose independent | sin | 16 | NA |