Os12g0615300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EGF-like calcium-binding domain containing protein.
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Os12g0615300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EGF-like calcium-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.22 | 0.528 | 7.72 | 0.242 | 1.38 | 1.51 | 1.56 | 1.62 | 0.403 | 21.4 | 55.96 | 856 | -- | -- |
| 128.65 | 0.528 | 7.71 | 0.362 | 1.34 | 1.57 | 0.931 | -- | 0.41 | 21.7 | 51.74 | 900 | -- | -- |
| 132.99 | 0.537 | 7.72 | 0.27 | 1.25 | 1.4 | -- | 0.865 | 0.356 | 21.6 | 53.39 | 909 | -- | -- |
| 132.06 | 0.535 | 7.71 | 0.305 | 1.31 | 1.53 | -- | -- | 0.417 | 21.8 | 52.95 | 908 | -- | -- |
| 166.29 | 0.601 | 7.67 | 0.255 | -- | 1.11 | -- | 0.535 | 0.437 | -- | 54.64 | 1509 | -- | -- |
| 164.65 | 0.602 | 7.71 | 0.282 | 0.736 | -- | 0.757 | -- | 0.374 | 21.6 | -- | -- | -- | -- |
| 166.78 | 0.605 | 7.71 | 0.254 | 0.732 | -- | -- | -- | 0.373 | 21.6 | -- | -- | -- | -- |
| 166.56 | 0.601 | 7.68 | 0.305 | -- | 1.11 | -- | -- | 0.421 | -- | 52 | 1499 | -- | -- |
| 134.71 | 0.541 | 7.72 | -- | 1.31 | 1.51 | -- | -- | 0.383 | 21.8 | 54.19 | 908 | -- | -- |
| 198.45 | 0.658 | 7.69 | 0.26 | -- | -- | -- | -- | 0.371 | -- | -- | -- | -- | -- |
| 168.48 | 0.607 | 7.72 | -- | 0.732 | -- | -- | -- | 0.345 | 21.6 | -- | -- | -- | -- |
| 168.99 | 0.605 | 7.68 | -- | -- | 1.11 | -- | -- | 0.397 | -- | 54 | 1500 | -- | -- |
| 200.23 | 0.66 | 7.7 | -- | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.16 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 2 | 123.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 6 | 123.87 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 16 | 124.21 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 18 | 124.23 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 32 | 124.56 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 17 |
| 37 | 124.63 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 42 | 124.71 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 56 | 124.88 | humidity | 80 | 1440 | < th | dose dependent | sin | 7 | NA |
| 60 | 125.02 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 64 | 125.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 16 |
| 110 | 125.62 | humidity | 70 | 720 | > th | dose dependent | sin | 20 | NA |
| 193 | 126.28 | humidity | 80 | 720 | < th | dose independent | sin | 20 | NA |
| 206 | 126.33 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 16 |
| 219 | 126.42 | humidity | 80 | 720 | > th | dose independent | sin | 21 | NA |
| 221 | 126.44 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 223 | 126.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 303 | 127.04 | humidity | 80 | 720 | > th | dose independent | rect. | 9 | 13 |
| 333 | 127.20 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 343 | 127.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 350 | 127.33 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 376 | 127.43 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 406 | 127.54 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 450 | 127.77 | humidity | 70 | 1440 | > th | dose independent | sin | 7 | NA |
| 548 | 128.21 | humidity | 60 | 720 | > th | dose dependent | no | NA | NA |
| 549 | 128.21 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 11 |
| 551 | 128.21 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 552 | 128.22 | humidity | 80 | 720 | < th | dose independent | rect. | 15 | 5 |
| 563 | 128.24 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 709 | 128.77 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 738 | 128.85 | humidity | 70 | 1440 | < th | dose independent | sin | 8 | NA |
| 739 | 128.85 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 787 | 128.96 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 5 |