Os12g0615100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os12g0615100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.15 | 0.262 | 7.9 | -0.631 | 0.215 | -0.983 | 0.36 | -0.446 | -0.303 | 8.23 | 28.04 | 106 | -- | -- |
| 31.42 | 0.261 | 7.91 | -0.679 | 0.2 | -0.922 | 0.453 | -- | -0.306 | 8.67 | 28.43 | 100 | -- | -- |
| 31.48 | 0.261 | 7.9 | -0.618 | 0.226 | -1.01 | -- | -0.498 | -0.305 | 7.71 | 27.93 | 113 | -- | -- |
| 31.82 | 0.263 | 7.91 | -0.701 | 0.217 | -1.01 | -- | -- | -0.329 | 7.55 | 28.61 | 105 | -- | -- |
| 33.58 | 0.271 | 7.91 | -0.578 | -- | -0.942 | -- | -0.56 | -0.288 | -- | 27.93 | 113 | -- | -- |
| 44.25 | 0.312 | 7.87 | -0.473 | 0.311 | -- | 0.551 | -- | -0.118 | 12.2 | -- | -- | -- | -- |
| 45.57 | 0.316 | 7.87 | -0.452 | 0.309 | -- | -- | -- | -0.116 | 12.1 | -- | -- | -- | -- |
| 33.66 | 0.271 | 7.91 | -0.669 | -- | -0.93 | -- | -- | -0.297 | -- | 29.58 | 6 | -- | -- |
| 43.44 | 0.307 | 7.88 | -- | 0.199 | -0.705 | -- | -- | -0.19 | 9.19 | 29.2 | 83 | -- | -- |
| 51.57 | 0.336 | 7.87 | -0.462 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 50.95 | 0.334 | 7.85 | -- | 0.315 | -- | -- | -- | -0.0654 | 12.2 | -- | -- | -- | -- |
| 44.72 | 0.312 | 7.89 | -- | -- | -0.755 | -- | -- | -0.192 | -- | 29.8 | 3 | -- | -- |
| 57.2 | 0.353 | 7.86 | -- | -- | -- | -- | -- | -0.069 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 7 | 31.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 9 | 31.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 12 | 31.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 13 | 31.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 15 | 31.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 16 | 31.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 17 | 31.57 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 21 | 31.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 26 | 31.76 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 32 | 31.81 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 37 | 31.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 48 | 32.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 78 | 32.29 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 88 | 32.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 97 | 32.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 116 | 32.57 | humidity | 50 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 119 | 32.57 | humidity | 50 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 135 | 32.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 136 | 32.59 | humidity | 50 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 141 | 32.60 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 145 | 32.62 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 149 | 32.64 | humidity | 50 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 154 | 32.65 | humidity | 50 | 14400 | > th | dose independent | sin | 7 | NA |
| 172 | 32.65 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 194 | 32.69 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 207 | 32.72 | humidity | 50 | 14400 | < th | dose independent | sin | 7 | NA |
| 225 | 32.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 320 | 32.87 | humidity | 70 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 351 | 32.91 | humidity | 60 | 14400 | < th | dose dependent | rect. | 19 | 15 |
| 358 | 32.93 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 361 | 32.94 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 362 | 32.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 376 | 32.98 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 383 | 33.00 | humidity | 50 | 14400 | < th | dose dependent | sin | 9 | NA |
| 396 | 33.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 443 | 33.09 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 448 | 33.12 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 461 | 33.15 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 478 | 33.17 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 483 | 33.18 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 484 | 33.18 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 507 | 33.22 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 22 |
| 525 | 33.27 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 6 |
| 575 | 33.32 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 718 | 33.33 | humidity | 50 | 14400 | < th | dose dependent | sin | 2 | NA |
| 726 | 33.34 | humidity | 50 | 14400 | < th | dose dependent | sin | 23 | NA |
| 750 | 33.35 | humidity | 50 | 14400 | < th | dose dependent | sin | 21 | NA |
| 757 | 33.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 824 | 33.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 884 | 33.45 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 894 | 33.45 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |