Os12g0614800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EGF-like calcium-binding domain containing protein.
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Os12g0614800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EGF-like calcium-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.18 | 0.54 | 2.46 | 0.824 | 0.0213 | -47 | -0.433 | 121 | 0.115 | 4.11 | 46.72 | 175 | -- | -- |
| 137.1 | 0.545 | 2.75 | 0.0973 | 0.0397 | 1.45 | 0.164 | -- | 0.137 | 11 | 49.31 | 288 | -- | -- |
| 129.9 | 0.531 | 2.31 | 1.23 | 0.0447 | -47.1 | -- | 122 | 0.11 | 8.19 | 43.17 | 154 | -- | -- |
| 135.22 | 0.542 | 2.75 | 0.0499 | 0.0185 | 2.16 | -- | -- | 0.104 | 11.5 | 46.02 | 175 | -- | -- |
| 129.98 | 0.531 | 2.3 | 1.24 | -- | -47.2 | -- | 123 | 0.119 | -- | 43.15 | 151 | -- | -- |
| 140.8 | 0.556 | 2.74 | 0.168 | 0.00171 | -- | 0.713 | -- | 0.114 | 16.3 | -- | -- | -- | -- |
| 142.1 | 0.558 | 2.74 | 0.174 | 0.0404 | -- | -- | -- | 0.117 | 10.6 | -- | -- | -- | -- |
| 135.15 | 0.541 | 2.74 | 0.0885 | -- | 2.18 | -- | -- | 0.121 | -- | 46.02 | 175 | -- | -- |
| 135.28 | 0.542 | 2.75 | -- | 0.043 | 2.18 | -- | -- | 0.103 | 6.78 | 46 | 175 | -- | -- |
| 142.2 | 0.557 | 2.74 | 0.174 | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
| 142.9 | 0.559 | 2.75 | -- | 0.0394 | -- | -- | -- | 0.098 | 10.3 | -- | -- | -- | -- |
| 135.36 | 0.542 | 2.74 | -- | -- | 2.23 | -- | -- | 0.114 | -- | 46 | 175 | -- | -- |
| 143 | 0.558 | 2.75 | -- | -- | -- | -- | -- | 0.098 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.79 | humidity | 50 | 10 | < th | dose independent | rect. | 15 | 1 |
| 2 | 127.79 | humidity | 50 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 7 | 128.41 | wind | 1 | 30 | < th | dose independent | rect. | 15 | 1 |
| 9 | 128.41 | wind | 1 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 80 | 128.84 | humidity | 50 | 90 | < th | dose independent | rect. | 14 | 4 |
| 194 | 129.36 | humidity | 50 | 90 | < th | dose dependent | sin | 12 | NA |
| 215 | 129.91 | humidity | 50 | 90 | < th | dose independent | sin | 12 | NA |
| 218 | 130.21 | humidity | 50 | 90 | > th | dose independent | sin | 12 | NA |
| 252 | 132.30 | temperature | 30 | 90 | > th | dose independent | rect. | 14 | 2 |
| 345 | 133.17 | temperature | 30 | 90 | > th | dose independent | rect. | 10 | 6 |
| 352 | 133.32 | temperature | 30 | 90 | > th | dose independent | rect. | 14 | 21 |
| 357 | 133.41 | temperature | 30 | 90 | > th | dose independent | rect. | 14 | 5 |
| 377 | 133.51 | temperature | 30 | 90 | > th | dose independent | rect. | 14 | 23 |
| 386 | 133.58 | wind | 3 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 387 | 133.59 | temperature | 30 | 90 | > th | dose independent | sin | 17 | NA |
| 469 | 133.93 | temperature | 30 | 90 | < th | dose independent | sin | 15 | NA |
| 471 | 133.93 | wind | 5 | 720 | > th | dose independent | rect. | 6 | 2 |
| 555 | 134.25 | temperature | 30 | 90 | > th | dose independent | rect. | 12 | 23 |
| 604 | 134.27 | temperature | 30 | 90 | > th | dose independent | no | NA | NA |
| 697 | 134.27 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 703 | 134.31 | humidity | 50 | 270 | < th | dose independent | rect. | 12 | 5 |
| 740 | 134.33 | wind | 7 | 30 | > th | dose independent | rect. | 17 | 1 |
| 864 | 134.71 | temperature | 25 | 720 | > th | dose dependent | rect. | 4 | 2 |
| 899 | 134.73 | temperature | 30 | 90 | < th | dose independent | no | NA | NA |
| 955 | 134.82 | wind | 3 | 720 | > th | dose independent | rect. | 5 | 5 |
| 987 | 134.89 | humidity | 50 | 270 | < th | dose dependent | sin | 7 | NA |
| 991 | 134.90 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 1 |