Os12g0613700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0613700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Transcriptional factor B3 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.22 | 0.283 | 9.98 | 0.591 | 0.564 | -0.558 | -0.239 | -0.194 | 0.0463 | 14.2 | 74 | 1058 | -- | -- |
| 36.23 | 0.28 | 9.98 | 0.578 | 0.556 | -0.58 | -0.29 | -- | 0.0509 | 13.9 | 73.74 | 999 | -- | -- |
| 36.41 | 0.281 | 9.98 | 0.594 | 0.56 | -0.567 | -- | -0.281 | 0.0452 | 14.1 | 73.92 | 1038 | -- | -- |
| 36.43 | 0.281 | 9.98 | 0.565 | 0.55 | -0.616 | -- | -- | 0.0481 | 13.6 | 74 | 952 | -- | -- |
| 40.77 | 0.297 | 9.99 | 0.623 | -- | -0.418 | -- | 0.281 | 0.0767 | -- | 75 | 230 | -- | -- |
| 44.82 | 0.314 | 9.98 | 0.652 | 0.454 | -- | -0.321 | -- | 0.0993 | 15.6 | -- | -- | -- | -- |
| 45.13 | 0.315 | 9.98 | 0.647 | 0.452 | -- | -- | -- | 0.0974 | 15.6 | -- | -- | -- | -- |
| 40.62 | 0.297 | 9.98 | 0.606 | -- | -0.446 | -- | -- | 0.078 | -- | 76 | 230 | -- | -- |
| 44.2 | 0.31 | 10 | -- | 0.552 | -0.664 | -- | -- | -0.024 | 13.8 | 70 | 1004 | -- | -- |
| 56.5 | 0.351 | 9.98 | 0.628 | -- | -- | -- | -- | 0.0854 | -- | -- | -- | -- | -- |
| 56.16 | 0.351 | 10 | -- | 0.44 | -- | -- | -- | 0.0254 | 15.6 | -- | -- | -- | -- |
| 50.13 | 0.33 | 10 | -- | -- | -0.475 | -- | -- | 0.00479 | -- | 76 | 272 | -- | -- |
| 66.9 | 0.382 | 9.99 | -- | -- | -- | -- | -- | 0.0157 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 9 | 35.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 27 | 35.18 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 32 | 35.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 39 | 35.29 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 69 | 35.43 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 84 | 35.49 | humidity | 80 | 1440 | < th | dose dependent | sin | 7 | NA |
| 139 | 35.74 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 155 | 35.82 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 163 | 35.85 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 177 | 35.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 186 | 35.93 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
| 188 | 35.96 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 209 | 36.02 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 245 | 36.10 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 267 | 36.16 | humidity | 70 | 1440 | > th | dose independent | sin | 9 | NA |
| 280 | 36.20 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 323 | 36.32 | humidity | 70 | 1440 | < th | dose independent | sin | 9 | NA |
| 397 | 36.42 | humidity | 60 | 1440 | > th | dose dependent | sin | 2 | NA |
| 422 | 36.50 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 20 |
| 477 | 36.60 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 523 | 36.68 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 762 | 36.99 | humidity | 70 | 720 | > th | dose independent | rect. | 8 | 20 |
| 802 | 37.04 | humidity | 70 | 720 | > th | dose independent | rect. | 23 | 21 |
| 890 | 37.16 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 18 |