Os12g0611100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like serine/threonine kinase.
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Os12g0611100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor-like serine/threonine kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284.67 | 0.793 | 8.3 | 0.994 | 2.41 | 1.79 | 2.83 | 1.94 | 1.1 | 21.7 | 70.09 | 1322 | -- | -- |
| 293.33 | 0.798 | 8.29 | 1.28 | 2.42 | 1.9 | 2.71 | -- | 1.07 | 21.7 | 69 | 1309 | -- | -- |
| 313.84 | 0.825 | 8.29 | 0.928 | 2.38 | 1.78 | -- | 1.6 | 1.11 | 21.9 | 70.23 | 1323 | -- | -- |
| 318.9 | 0.832 | 8.27 | 1.19 | 2.47 | 1.93 | -- | -- | 1.17 | 22 | 70.88 | 1275 | -- | -- |
| 606.19 | 1.15 | 8.25 | 0.89 | -- | 1.89 | -- | 1.86 | 1.09 | -- | 72 | 1479 | -- | -- |
| 429.89 | 0.972 | 8.31 | 0.864 | 2.27 | -- | 2.65 | -- | 0.92 | 21.3 | -- | -- | -- | -- |
| 454.04 | 0.998 | 8.32 | 0.763 | 2.25 | -- | -- | -- | 0.914 | 21.5 | -- | -- | -- | -- |
| 611.01 | 1.15 | 8.19 | 1.16 | -- | 1.98 | -- | -- | 1.2 | -- | 71.69 | 1479 | -- | -- |
| 354.99 | 0.878 | 8.29 | -- | 2.39 | 1.77 | -- | -- | 1.09 | 21.9 | 71.9 | 1323 | -- | -- |
| 752.54 | 1.28 | 8.25 | 0.778 | -- | -- | -- | -- | 0.907 | -- | -- | -- | -- | -- |
| 469.37 | 1.01 | 8.33 | -- | 2.25 | -- | -- | -- | 0.829 | 21.5 | -- | -- | -- | -- |
| 645.41 | 1.18 | 8.22 | -- | -- | 1.83 | -- | -- | 1.05 | -- | 72 | 1484 | -- | -- |
| 768.49 | 1.29 | 8.27 | -- | -- | -- | -- | -- | 0.821 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 279.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 5 | 282.50 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 7 | 283.94 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 11 | 284.89 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 13 | 285.27 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 16 | 285.94 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 20 | 286.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 21 | 286.67 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 22 | 286.70 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 12 |
| 30 | 286.94 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 37 | 287.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 47 | 287.55 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 48 | 287.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 52 | 287.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 60 | 287.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 72 | 287.90 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 10 |
| 99 | 288.52 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 13 |
| 109 | 288.74 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 133 | 288.98 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 138 | 289.01 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 18 |
| 232 | 289.90 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 263 | 290.25 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 272 | 290.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 273 | 290.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 278 | 290.34 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 19 |
| 280 | 290.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 310 | 290.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 317 | 290.41 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 420 | 290.98 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 423 | 291.01 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 447 | 291.11 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 596 | 291.87 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 700 | 292.20 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 703 | 292.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 704 | 292.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 780 | 292.95 | humidity | 70 | 1440 | > th | dose independent | sin | 23 | NA |
| 837 | 293.43 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 864 | 293.71 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 896 | 293.99 | humidity | 70 | 1440 | < th | dose independent | sin | 22 | NA |
| 897 | 293.99 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 898 | 294.02 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 954 | 294.46 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 973 | 294.60 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |