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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0610100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.04 (0.0214) R2 : 0.0128
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.11 (0.0451) R2dN8 : 0.0166 R2N8 : 0.0128
σ : 0.403
deviance : 74.58
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.32 0.391 3.05 -0.0516 0.122 -0.309 -0.157 1.48 0.0963 6.86 1.146 16 -- --
71.42 0.394 3.04 0.011 0.135 -0.196 -0.369 -- 0.109 6.4 1.123 15 -- --
69.37 0.388 3.05 -0.056 0.12 -0.316 -- 1.51 0.0969 7.31 1.167 16 -- --
71.61 0.394 3.04 0.0155 0.136 -0.203 -- -- 0.113 7.23 1.1 15 -- --
70.07 0.39 3.06 -0.063 -- -0.364 -- 1.57 0.0984 -- 1.117 16 -- --
72.39 0.399 3.04 0.0441 0.191 -- -0.338 -- 0.109 5.79 -- -- -- --
72.64 0.399 3.04 0.0425 0.19 -- -- -- 0.111 6.22 -- -- -- --
72.51 0.397 3.04 0.0109 -- -0.256 -- -- 0.117 -- 1.117 15 -- --
71.61 0.394 3.04 -- 0.136 -0.203 -- -- 0.113 7.06 1.1 15 -- --
74.52 0.403 3.04 0.0477 -- -- -- -- 0.115 -- -- -- -- --
72.69 0.399 3.04 -- 0.191 -- -- -- 0.106 6.21 -- -- -- --
72.51 0.397 3.04 -- -- -0.257 -- -- 0.116 -- 1.166 15 -- --
74.58 0.403 3.04 -- -- -- -- -- 0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.41 temperature 20.0 30 > th dose dependent rect. 2 1
2 61.46 temperature 20.0 30 > th dose independent rect. 2 1
3 61.46 atmosphere 1005.0 30 > th dose dependent rect. 2 1
5 61.50 atmosphere 1005.0 30 > th dose independent rect. 2 1
10 61.58 wind 3.0 30 < th dose dependent rect. 2 1
13 61.60 wind 3.0 30 < th dose independent rect. 2 1
15 61.62 humidity 80.0 30 > th dose independent rect. 2 1
19 61.65 temperature 10.0 30 > th dose independent rect. 2 1
21 61.65 temperature 30.0 30 < th dose independent rect. 2 1
22 61.65 humidity 50.0 30 > th dose independent rect. 2 1
26 61.65 atmosphere 1010.0 30 < th dose independent rect. 2 1
28 61.65 radiation 1.0 30 < th dose independent rect. 2 1
33 61.65 precipitation 0.1 30 < th dose independent rect. 2 1
34 61.65 temperature 10.0 30 > th dose independent rect. 3 23
35 61.65 humidity 50.0 30 > th dose dependent rect. 2 1
38 61.65 radiation 1.0 30 < th dose dependent rect. 2 1
43 61.65 precipitation 0.1 30 < th dose dependent rect. 2 1
49 61.96 atmosphere 1015.0 30 < th dose dependent rect. 2 1
50 62.10 temperature 30.0 30 < th dose dependent rect. 2 1
52 62.19 radiation 1.0 4320 < th dose dependent rect. 3 1
53 62.21 radiation 10.0 43200 < th dose dependent rect. 3 1
59 62.23 wind 1.0 30 > th dose independent rect. 2 1
60 62.23 wind 9.0 1440 < th dose independent rect. 3 1
61 62.23 temperature 10.0 1440 > th dose independent rect. 3 1
64 62.23 temperature 30.0 1440 < th dose independent rect. 3 1
68 62.23 humidity 50.0 1440 > th dose independent rect. 3 1
77 62.23 atmosphere 995.0 1440 > th dose independent rect. 3 1
78 62.23 radiation 1.0 1440 < th dose independent rect. 3 1
98 62.23 temperature 10.0 1440 > th dose independent rect. 4 23
164 63.27 atmosphere 995.0 30 > th dose independent rect. 3 23
172 63.76 precipitation 0.1 30 < th dose independent rect. 3 23
173 63.76 precipitation 0.1 30 < th dose dependent rect. 3 23
176 64.06 wind 9.0 30 < th dose independent rect. 3 23
192 65.43 humidity 50.0 30 > th dose independent rect. 3 23
238 67.04 temperature 30.0 30 < th dose independent rect. 3 23
247 67.30 humidity 90.0 90 < th dose independent rect. 2 1
248 67.35 atmosphere 1005.0 10 > th dose dependent rect. 2 6
255 67.46 atmosphere 995.0 720 > th dose independent rect. 7 8
261 67.56 precipitation 0.1 720 < th dose independent rect. 19 8
262 67.56 precipitation 0.1 720 < th dose dependent rect. 19 8
263 67.57 temperature 10.0 720 > th dose independent rect. 7 8
264 67.57 atmosphere 1015.0 720 < th dose independent rect. 7 8
265 67.57 temperature 10.0 720 > th dose independent rect. 15 16
269 67.63 wind 9.0 720 < th dose independent rect. 19 8
272 67.69 temperature 10.0 720 > th dose independent rect. 19 8
273 67.69 temperature 30.0 720 < th dose independent rect. 19 8
274 67.69 humidity 50.0 720 > th dose independent rect. 19 8
275 67.69 atmosphere 995.0 720 > th dose independent rect. 19 8
276 67.69 radiation 1.0 720 < th dose independent rect. 19 8
281 67.69 temperature 10.0 720 > th dose independent rect. 3 16
283 67.69 radiation 1.0 720 < th dose dependent rect. 19 8
290 67.75 humidity 90.0 90 < th dose independent rect. 1 6
297 67.85 precipitation 0.1 720 < th dose independent rect. 15 16
298 67.85 precipitation 0.1 720 < th dose dependent rect. 15 16
302 67.96 atmosphere 995.0 720 > th dose independent rect. 3 16
303 67.96 atmosphere 995.0 720 > th dose independent rect. 15 16
306 68.00 precipitation 0.1 720 < th dose independent rect. 7 8
308 68.00 precipitation 0.1 720 < th dose dependent rect. 7 8
325 68.27 wind 3.0 30 < th dose dependent rect. 2 6
327 68.29 radiation 40.0 720 < th dose independent rect. 15 16
328 68.29 atmosphere 1015.0 30 < th dose independent rect. 3 23
333 68.45 wind 1.0 10 < th dose independent rect. 6 21
334 68.46 wind 1.0 10 < th dose independent rect. 12 15
335 68.46 atmosphere 995.0 720 > th dose independent rect. 23 16
356 68.65 temperature 25.0 270 > th dose independent rect. 23 4
358 68.67 temperature 10.0 720 > th dose independent rect. 15 8
359 68.67 temperature 10.0 720 > th dose independent rect. 23 16
360 68.67 atmosphere 1015.0 720 < th dose independent rect. 3 16
370 68.74 precipitation 0.1 720 < th dose independent rect. 15 8
371 68.74 precipitation 0.1 720 < th dose dependent rect. 15 8
379 68.81 wind 1.0 10 > th dose independent rect. 8 22
386 68.85 radiation 10.0 30 < th dose dependent rect. 3 23
401 68.89 temperature 10.0 720 > th dose independent rect. 3 8
402 68.89 humidity 50.0 720 > th dose independent rect. 3 8
403 68.89 atmosphere 995.0 720 > th dose independent rect. 3 8
404 68.89 temperature 10.0 720 > th dose independent rect. 11 16
416 68.97 wind 1.0 10 < th dose independent rect. 2 5
425 69.02 wind 1.0 30 > th dose independent rect. 3 23
454 69.08 wind 9.0 720 < th dose independent rect. 3 8
470 69.13 wind 9.0 720 < th dose independent rect. 7 8
480 69.16 wind 9.0 720 < th dose independent rect. 15 16
483 69.17 atmosphere 995.0 720 > th dose independent rect. 15 8
484 69.17 precipitation 0.1 720 < th dose independent rect. 11 16
488 69.17 precipitation 0.1 720 < th dose dependent rect. 11 16
490 69.18 humidity 90.0 90 < th dose independent rect. 1 3
539 69.29 wind 3.0 30 < th dose dependent rect. 2 11
540 69.30 precipitation 0.1 720 < th dose independent rect. 3 16
543 69.30 precipitation 0.1 720 < th dose dependent rect. 3 16
552 69.34 wind 1.0 10 > th dose independent sin 16 NA
557 69.36 atmosphere 995.0 720 > th dose independent rect. 11 16
583 69.47 temperature 15.0 30 > th dose dependent rect. 2 6
585 69.48 atmosphere 1005.0 30 > th dose dependent rect. 6 1
620 69.55 wind 3.0 30 < th dose dependent rect. 6 1
626 69.56 radiation 40.0 720 < th dose independent rect. 15 8
635 69.58 atmosphere 995.0 30 > th dose dependent rect. 3 23
642 69.60 temperature 30.0 30 < th dose dependent rect. 6 1
643 69.60 radiation 1.0 30 > th dose dependent rect. 6 1
649 69.62 atmosphere 1005.0 30 > th dose independent rect. 2 6
672 69.68 atmosphere 1000.0 10 > th dose independent rect. 8 18
688 69.70 humidity 50.0 720 > th dose independent rect. 7 8
689 69.70 humidity 80.0 30 > th dose dependent rect. 6 1
692 69.71 radiation 1.0 90 < th dose independent rect. 3 22
694 69.72 wind 3.0 30 < th dose independent rect. 6 1
717 69.78 wind 1.0 10 > th dose independent sin 7 NA
730 69.79 wind 1.0 30 > th dose independent rect. 6 1
731 69.79 humidity 90.0 30 < th dose independent rect. 6 1
732 69.79 precipitation 0.1 720 < th dose independent rect. 3 8
736 69.79 precipitation 0.1 720 < th dose dependent rect. 3 8
737 69.79 wind 9.0 30 < th dose dependent rect. 3 23
738 69.80 atmosphere 1000.0 30 > th dose independent rect. 6 1
742 69.81 wind 9.0 1440 < th dose independent rect. 7 1
743 69.81 temperature 10.0 1440 > th dose independent rect. 7 1
747 69.81 temperature 30.0 1440 < th dose independent rect. 7 1
751 69.81 humidity 50.0 1440 > th dose independent rect. 7 1
757 69.81 atmosphere 995.0 1440 > th dose independent rect. 7 1
758 69.81 atmosphere 1015.0 1440 < th dose independent rect. 7 1
760 69.81 temperature 10.0 1440 > th dose independent rect. 8 23
764 69.81 wind 1.0 30 < th dose dependent rect. 13 14
771 69.82 temperature 10.0 30 > th dose independent rect. 6 1
773 69.82 temperature 30.0 30 < th dose independent rect. 6 1
774 69.82 humidity 50.0 30 > th dose independent rect. 6 1
779 69.82 atmosphere 1015.0 30 < th dose independent rect. 6 1
780 69.82 radiation 20.0 30 < th dose independent rect. 6 1
783 69.82 precipitation 0.1 30 < th dose independent rect. 6 1
784 69.82 temperature 10.0 30 > th dose independent rect. 7 23
786 69.82 precipitation 0.1 30 < th dose dependent rect. 6 1
802 69.84 radiation 1.0 30 > th dose independent rect. 6 1
804 69.84 wind 9.0 30 < th dose independent rect. 7 23
866 69.90 radiation 40.0 30 < th dose dependent rect. 6 1
872 69.91 wind 1.0 10 > th dose independent rect. 22 8
875 69.91 temperature 10.0 30 > th dose dependent rect. 6 1
881 69.93 atmosphere 1000.0 10 > th dose independent rect. 16 10
882 69.93 precipitation 0.1 720 < th dose independent rect. 23 16
886 69.93 precipitation 0.1 720 < th dose dependent rect. 23 16
953 69.96 temperature 10.0 30 > th dose dependent rect. 3 23
955 69.97 wind 1.0 720 > th dose independent rect. 15 8
957 69.97 wind 1.0 10 > th dose independent rect. 18 12
965 69.98 radiation 20.0 10 < th dose dependent rect. 16 10
987 70.00 atmosphere 1000.0 10 > th dose independent rect. 14 12
1000 70.01 atmosphere 995.0 30 > th dose dependent rect. 8 18