Os12g0609100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0609100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.99 | 0.425 | 3.01 | -0.315 | 0.116 | 0.871 | -0.0311 | -3.29 | 0.167 | 3.61 | 30.13 | 293 | -- | -- |
| 82.69 | 0.424 | 2.98 | -0.0342 | 0.0977 | 0.52 | 0.131 | -- | 0.18 | 3.62 | 30.4 | 334 | -- | -- |
| 81.99 | 0.422 | 3.01 | -0.311 | 0.115 | 0.868 | -- | -3.25 | 0.168 | 3.52 | 30.18 | 300 | -- | -- |
| 82.41 | 0.423 | 2.98 | -0.0461 | 0.132 | 0.495 | -- | -- | 0.171 | 3.26 | 29.8 | 174 | -- | -- |
| 82.61 | 0.423 | 3.01 | -0.257 | -- | 0.819 | -- | -3.22 | 0.189 | -- | 30.57 | 321 | -- | -- |
| 87.77 | 0.439 | 2.99 | 0.0354 | 0.0895 | -- | 0.426 | -- | 0.147 | 19.4 | -- | -- | -- | -- |
| 88.26 | 0.44 | 2.99 | 0.0253 | 0.09 | -- | -- | -- | 0.147 | 19.9 | -- | -- | -- | -- |
| 83.07 | 0.424 | 2.98 | -0.0283 | -- | 0.465 | -- | -- | 0.188 | -- | 30.5 | 320 | -- | -- |
| 82.44 | 0.423 | 2.98 | -- | 0.126 | 0.485 | -- | -- | 0.173 | 2.55 | 29.81 | 172 | -- | -- |
| 88.7 | 0.44 | 2.99 | 0.0243 | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
| 88.27 | 0.439 | 2.99 | -- | 0.0899 | -- | -- | -- | 0.144 | 19.9 | -- | -- | -- | -- |
| 83.09 | 0.425 | 2.98 | -- | -- | 0.459 | -- | -- | 0.187 | -- | 30.45 | 320 | -- | -- |
| 88.71 | 0.44 | 2.99 | -- | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.02 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 3 | 81.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 5 | 81.47 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 11 |
| 7 | 81.68 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 8 | 81.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 10 |
| 13 | 81.78 | temperature | 30.0 | 270 | > th | dose independent | rect. | 13 | 22 |
| 15 | 81.84 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 21 | 81.92 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 22 | 81.93 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 23 | 81.93 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 25 | 81.94 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 26 | 81.94 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 29 | 81.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 33 | 81.94 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 42 | 81.94 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 43 | 81.94 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 63 | 81.94 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 67 | 81.94 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 83 | 81.97 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 85 | 81.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 87 | 81.97 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 90 | 81.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 96 | 81.99 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 98 | 82.00 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 102 | 82.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 105 | 82.01 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 108 | 82.01 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 109 | 82.01 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 111 | 82.01 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 116 | 82.01 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 117 | 82.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 118 | 82.01 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 123 | 82.01 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 126 | 82.02 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 134 | 82.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 23 |
| 140 | 82.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 23 |
| 141 | 82.09 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 142 | 82.10 | temperature | 30.0 | 270 | > th | dose independent | sin | 19 | NA |
| 145 | 82.12 | temperature | 30.0 | 90 | < th | dose independent | sin | 16 | NA |
| 146 | 82.12 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 148 | 82.14 | temperature | 30.0 | 270 | > th | dose independent | no | NA | NA |
| 150 | 82.14 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 11 |
| 243 | 82.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 249 | 82.19 | temperature | 30.0 | 270 | < th | dose independent | no | NA | NA |
| 300 | 82.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 302 | 82.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 23 |
| 337 | 82.39 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 339 | 82.40 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 342 | 82.40 | humidity | 70.0 | 90 | < th | dose independent | rect. | 14 | 21 |
| 348 | 82.42 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 372 | 82.47 | temperature | 30.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 394 | 82.50 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 22 |
| 397 | 82.52 | temperature | 30.0 | 720 | > th | dose independent | rect. | 9 | 2 |
| 400 | 82.52 | temperature | 30.0 | 270 | > th | dose dependent | no | NA | NA |
| 401 | 82.52 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 8 | 11 |
| 573 | 82.58 | temperature | 30.0 | 270 | > th | dose dependent | sin | 20 | NA |
| 607 | 82.62 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 9 |
| 617 | 82.66 | temperature | 30.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 754 | 82.84 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 776 | 82.87 | humidity | 70.0 | 90 | < th | dose independent | sin | 12 | NA |
| 778 | 82.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 779 | 82.87 | temperature | 30.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 804 | 82.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 839 | 82.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 23 |
| 954 | 82.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 21 |