Os12g0608900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os12g0608900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.31 | 0.484 | 3.12 | 0.846 | 0.103 | -0.192 | 0.0419 | 2.21 | 0.26 | 9.85 | 20.01 | 6068 | -- | -- |
| 109.94 | 0.492 | 3.22 | 0.161 | 0.168 | -0.368 | 0.131 | -- | 0.0729 | 12 | 10.09 | 15712 | -- | -- |
| 106.32 | 0.48 | 3.12 | 0.846 | 0.103 | -0.192 | -- | 2.2 | 0.259 | 9.75 | 20 | 6065 | -- | -- |
| 110.02 | 0.492 | 3.22 | 0.165 | 0.165 | -0.358 | -- | -- | 0.072 | 11.9 | -8.691 | 15655 | -- | -- |
| 106.95 | 0.482 | 3.13 | 0.847 | -- | -0.192 | -- | 2.21 | 0.261 | -- | 20 | 6093 | -- | -- |
| 111.24 | 0.494 | 3.23 | 0.0932 | 0.103 | -- | 0.0561 | -- | 0.0219 | 9.62 | -- | -- | -- | -- |
| 111.25 | 0.494 | 3.23 | 0.0951 | 0.103 | -- | -- | -- | 0.0219 | 9.47 | -- | -- | -- | -- |
| 110.69 | 0.49 | 3.21 | 0.303 | -- | -0.279 | -- | -- | 0.138 | -- | -5.749 | 15361 | -- | -- |
| 110.66 | 0.493 | 3.23 | -- | 0.146 | -0.279 | -- | -- | 0.0443 | 11.5 | -8.691 | 15655 | -- | -- |
| 111.87 | 0.494 | 3.24 | 0.0944 | -- | -- | -- | -- | 0.0222 | -- | -- | -- | -- | -- |
| 111.49 | 0.494 | 3.24 | -- | 0.103 | -- | -- | -- | 0.0113 | 9.4 | -- | -- | -- | -- |
| 111.58 | 0.492 | 3.23 | -- | -- | -0.152 | -- | -- | 0.0398 | -- | -1.574 | 6526 | -- | -- |
| 112.11 | 0.494 | 3.24 | -- | -- | -- | -- | -- | 0.0117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.13 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 8 | 104.59 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 9 | 104.60 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 19 | 104.62 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 30 | 104.70 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 38 | 104.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 41 | 104.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 46 | 104.98 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 67 | 105.02 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 70 | 105.03 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 71 | 105.04 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 18 |
| 73 | 105.05 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 18 |
| 77 | 105.05 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 82 | 105.07 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 97 | 105.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 123 | 105.09 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 124 | 105.09 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 132 | 105.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 134 | 105.09 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 13 |
| 142 | 105.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 143 | 105.10 | temperature | 25.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 158 | 105.11 | temperature | 25.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 218 | 105.14 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 20 |
| 223 | 105.14 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 234 | 105.15 | temperature | 25.0 | 43200 | < th | dose independent | no | NA | NA |
| 245 | 105.15 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 2 | 21 |
| 253 | 105.15 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 267 | 105.15 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 21 | 23 |
| 273 | 105.16 | temperature | 25.0 | 43200 | > th | dose independent | no | NA | NA |
| 284 | 105.16 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 21 | 19 |
| 287 | 105.16 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 21 | 19 |
| 356 | 105.17 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 396 | 105.18 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 400 | 105.19 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 497 | 105.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 8 |
| 528 | 105.23 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 551 | 105.24 | temperature | 25.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 552 | 105.24 | temperature | 25.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 557 | 105.24 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 1 | 14 |
| 575 | 105.24 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 584 | 105.25 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 643 | 105.27 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 721 | 105.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 728 | 105.33 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 770 | 105.34 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 803 | 105.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 821 | 105.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 8 |
| 826 | 105.36 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 15 | 14 |
| 840 | 105.37 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 842 | 105.37 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 872 | 105.38 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 4 | NA |
| 874 | 105.38 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 4 | NA |
| 888 | 105.38 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 4 | NA |
| 925 | 105.39 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 982 | 105.40 | temperature | 20.0 | 43200 | > th | dose dependent | no | NA | NA |
| 991 | 105.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 995 | 105.40 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 2 | 18 |