Os12g0608500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os12g0608500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.95 | 0.621 | 3.9 | 0.123 | 1.91 | -0.958 | 0.326 | -0.383 | 0.284 | 23.3 | 82.85 | 850 | -- | -- |
| 174.04 | 0.614 | 3.9 | 0.175 | 1.87 | -0.991 | 0.377 | -- | 0.282 | 23.7 | 81 | 1046 | -- | -- |
| 174.93 | 0.616 | 3.9 | 0.145 | 1.91 | -1.03 | -- | 0.0369 | 0.284 | 23.5 | 81.99 | 925 | -- | -- |
| 174.38 | 0.615 | 3.89 | 0.158 | 1.87 | -1.01 | -- | -- | 0.289 | 23.7 | 81 | 1040 | -- | -- |
| 267.74 | 0.766 | 3.86 | 0.107 | -- | -1.86 | -- | -0.148 | 0.258 | -- | 82.03 | 1619 | -- | -- |
| 193 | 0.651 | 3.88 | 0.0174 | 1.6 | -- | 0.2 | -- | 0.326 | 23.9 | -- | -- | -- | -- |
| 193.17 | 0.651 | 3.88 | 0.0095 | 1.59 | -- | -- | -- | 0.325 | 23.9 | -- | -- | -- | -- |
| 262.82 | 0.758 | 3.85 | 0.0787 | -- | -1.8 | -- | -- | 0.3 | -- | 87.88 | 1625 | -- | -- |
| 175.01 | 0.616 | 3.89 | -- | 1.87 | -0.987 | -- | -- | 0.278 | 23.8 | 82 | 1040 | -- | -- |
| 353.26 | 0.878 | 3.84 | 0.0572 | -- | -- | -- | -- | 0.346 | -- | -- | -- | -- | -- |
| 193.17 | 0.65 | 3.88 | -- | 1.59 | -- | -- | -- | 0.324 | 23.9 | -- | -- | -- | -- |
| 262.99 | 0.758 | 3.85 | -- | -- | -1.8 | -- | -- | 0.291 | -- | 87.88 | 1625 | -- | -- |
| 353.34 | 0.877 | 3.84 | -- | -- | -- | -- | -- | 0.339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.19 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 2 | 175.29 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 5 | 175.49 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 5 |
| 11 | 175.67 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 12 |
| 15 | 175.90 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 22 |
| 22 | 176.14 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 25 | 176.15 | humidity | 50 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 28 | 176.20 | humidity | 70 | 720 | > th | dose independent | sin | 15 | NA |
| 29 | 176.21 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 39 | 176.30 | humidity | 70 | 720 | > th | dose independent | rect. | 10 | 21 |
| 48 | 176.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 55 | 176.43 | humidity | 50 | 720 | > th | dose dependent | sin | 17 | NA |
| 57 | 176.45 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 62 | 176.49 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 22 |
| 65 | 176.50 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 81 | 176.59 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 90 | 176.67 | humidity | 90 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 95 | 176.73 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 100 | 176.74 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 107 | 176.77 | humidity | 70 | 720 | > th | dose independent | rect. | 10 | 11 |
| 109 | 176.78 | humidity | 90 | 720 | < th | dose dependent | no | NA | NA |
| 112 | 176.78 | humidity | 90 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 113 | 176.78 | humidity | 90 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 114 | 176.79 | humidity | 80 | 720 | < th | dose dependent | sin | 16 | NA |
| 146 | 176.85 | humidity | 90 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 170 | 176.91 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 204 | 176.97 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 224 | 177.03 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 226 | 177.04 | humidity | 50 | 720 | > th | dose dependent | no | NA | NA |
| 243 | 177.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 268 | 177.09 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 270 | 177.09 | humidity | 50 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 293 | 177.12 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 328 | 177.15 | humidity | 70 | 720 | > th | dose independent | rect. | 13 | 16 |
| 470 | 177.31 | humidity | 50 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 471 | 177.32 | humidity | 70 | 720 | > th | dose independent | rect. | 24 | 23 |
| 589 | 177.49 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 618 | 177.53 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 638 | 177.56 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 676 | 177.63 | humidity | 70 | 720 | > th | dose independent | rect. | 3 | 18 |
| 697 | 177.66 | humidity | 70 | 720 | < th | dose independent | rect. | 13 | 22 |
| 896 | 177.86 | humidity | 70 | 720 | > th | dose independent | rect. | 13 | 23 |
| 915 | 177.89 | humidity | 70 | 720 | < th | dose independent | sin | 17 | NA |
| 932 | 177.91 | humidity | 80 | 30 | > th | dose independent | rect. | 19 | 9 |
| 940 | 177.92 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 17 |