Os12g0607800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os12g0607800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.05 | 0.258 | 2.81 | -0.0591 | 0.0177 | -0.226 | -0.112 | 1 | 0.0149 | 13.3 | 1.037 | 15 | -- | -- |
| 30.64 | 0.26 | 2.8 | -0.0198 | 0.0166 | -0.155 | -0.0525 | -- | 0.026 | 10.4 | 1.037 | 15 | -- | -- |
| 30.1 | 0.256 | 2.81 | -0.0617 | 0.0177 | -0.226 | -- | 0.959 | 0.0149 | 13.4 | 1 | 15 | -- | -- |
| 30.65 | 0.26 | 2.8 | -0.0221 | 0.019 | -0.16 | -- | -- | 0.0261 | 12.4 | 1 | 15 | -- | -- |
| 30.12 | 0.256 | 2.81 | -0.0611 | -- | -0.218 | -- | 0.955 | 0.0145 | -- | 1.011 | 15 | -- | -- |
| 31.44 | 0.263 | 2.8 | -0.00415 | 0.0411 | -- | -0.0434 | -- | 0.0233 | 6.03 | -- | -- | -- | -- |
| 31.45 | 0.263 | 2.8 | -0.00466 | 0.041 | -- | -- | -- | 0.0234 | 5.7 | -- | -- | -- | -- |
| 30.67 | 0.259 | 2.8 | -0.0221 | -- | -0.155 | -- | -- | 0.0258 | -- | 1.011 | 15 | -- | -- |
| 30.66 | 0.259 | 2.8 | -- | 0.0189 | -0.158 | -- | -- | 0.0285 | 12.4 | 1 | 15 | -- | -- |
| 31.53 | 0.262 | 2.8 | -0.00337 | -- | -- | -- | -- | 0.0244 | -- | -- | -- | -- | -- |
| 31.45 | 0.262 | 2.8 | -- | 0.0409 | -- | -- | -- | 0.0239 | 5.7 | -- | -- | -- | -- |
| 30.68 | 0.259 | 2.8 | -- | -- | -0.153 | -- | -- | 0.0282 | -- | 1 | 15 | -- | -- |
| 31.53 | 0.262 | 2.8 | -- | -- | -- | -- | -- | 0.0248 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.88 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 7 | 24.47 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 16 | 25.78 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 17 | 25.78 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 20 | 26.18 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 26.61 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 28 | 26.62 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 30 | 26.62 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 34 | 26.63 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 36 | 26.63 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 26.63 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 41 | 26.63 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 43 | 26.63 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 48 | 26.63 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 49 | 26.63 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 51 | 26.63 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 56 | 26.63 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 26.70 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 60 | 26.71 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 61 | 26.71 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 78 | 27.26 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 84 | 27.31 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 85 | 27.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 88 | 27.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 92 | 27.31 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 101 | 27.31 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 102 | 27.31 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 122 | 27.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 125 | 27.31 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 140 | 27.38 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 154 | 27.91 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 155 | 27.96 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 194 | 28.14 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 202 | 28.14 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 310 | 29.09 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 324 | 29.12 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 406 | 29.38 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 426 | 29.44 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 450 | 29.49 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 504 | 29.56 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 8 |
| 616 | 29.65 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 688 | 29.76 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 696 | 29.78 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 829 | 29.85 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 884 | 29.85 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 886 | 29.85 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 929 | 29.85 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 933 | 29.86 | humidity | 60.0 | 10 | < th | dose independent | rect. | 9 | 1 |