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Os12g0606900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0159) R2 : 0.54
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.604 (0.0382) R2dC : 0.253 R2C : 0.169
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.563 (0.0333) R2dN8 : 0.371 R2N8 : 0.287
σ : 0.299
deviance : 40.82
__
_____
C
peak time of C : 22.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.7 0.224 10.2 0.23 0.596 0.492 0.0953 -0.554 0.445 22.3 21.4 1605 -- --
23.39 0.225 10.2 0.367 0.595 0.54 0.109 -- 0.476 22.4 21.3 1608 -- --
22.71 0.222 10.3 0.217 0.593 0.491 -- -0.558 0.441 22.4 21.46 1730 -- --
23.41 0.225 10.2 0.374 0.597 0.527 -- -- 0.481 22.3 21.4 1605 -- --
40.53 0.297 10.2 0.293 -- 0.526 -- -0.406 0.442 -- 21.8 782 -- --
31.41 0.263 10.2 0.6 0.6 -- 0.0777 -- 0.629 22.4 -- -- -- --
31.43 0.263 10.2 0.597 0.6 -- -- -- 0.629 22.4 -- -- -- --
40.97 0.298 10.2 0.393 -- 0.583 -- -- 0.476 -- 21.37 787 -- --
26.28 0.239 10.2 -- 0.589 0.662 -- -- 0.413 22.5 21.2 1812 -- --
53.42 0.342 10.2 0.607 -- -- -- -- 0.631 -- -- -- -- --
40.82 0.299 10.2 -- 0.604 -- -- -- 0.563 22.4 -- -- -- --
44.67 0.311 10.2 -- -- 0.685 -- -- 0.404 -- 21.36 819 -- --
63.12 0.371 10.2 -- -- -- -- -- 0.564 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.34 wind 1.0 43200 < th dose dependent rect. 4 3
2 20.44 wind 1.0 43200 > th dose independent rect. 4 3
5 20.72 wind 1.0 43200 < th dose dependent rect. 2 6
6 20.85 wind 1.0 43200 < th dose independent rect. 4 4
10 21.34 wind 1.0 43200 > th dose independent rect. 2 6
11 21.41 wind 1.0 43200 > th dose dependent rect. 5 1
12 21.47 wind 9.0 43200 < th dose dependent rect. 5 1
20 21.81 humidity 80.0 43200 < th dose independent rect. 6 1
21 21.89 wind 1.0 43200 < th dose independent rect. 2 6
22 21.92 humidity 80.0 43200 > th dose independent rect. 6 1
23 21.95 wind 1.0 43200 < th dose dependent rect. 2 9
31 22.30 wind 9.0 43200 < th dose dependent rect. 4 4
38 22.41 wind 1.0 43200 < th dose dependent rect. 6 1
47 22.51 wind 1.0 43200 > th dose independent rect. 23 8
53 22.56 wind 1.0 43200 > th dose dependent rect. 4 4
60 22.61 humidity 80.0 14400 > th dose dependent rect. 13 1
61 22.62 radiation 1.0 14400 > th dose independent rect. 7 1
62 22.62 radiation 1.0 14400 < th dose independent rect. 7 1
72 22.72 wind 9.0 43200 < th dose dependent rect. 7 1
82 22.77 humidity 90.0 14400 > th dose dependent rect. 5 1
83 22.78 wind 3.0 43200 < th dose independent rect. 5 1
85 22.79 precipitation 0.1 14400 < th dose independent rect. 7 1
86 22.79 precipitation 0.1 14400 < th dose dependent rect. 7 1
91 22.82 precipitation 0.1 14400 > th dose independent rect. 7 1
92 22.82 wind 9.0 43200 > th dose dependent rect. 18 1
93 22.82 precipitation 0.1 14400 > th dose dependent rect. 7 1
97 22.83 wind 9.0 43200 < th dose dependent rect. 1 7
100 22.84 wind 9.0 43200 < th dose dependent rect. 23 9
101 22.85 wind 1.0 43200 < th dose independent rect. 23 9
104 22.86 wind 1.0 43200 > th dose dependent rect. 7 1
115 22.94 humidity 90.0 43200 > th dose dependent rect. 9 1
119 22.95 humidity 80.0 14400 > th dose independent rect. 13 2
125 22.97 wind 9.0 43200 > th dose independent rect. 18 1
130 22.99 humidity 80.0 43200 > th dose dependent rect. 10 4
134 23.00 wind 9.0 43200 < th dose independent rect. 10 3
135 23.00 precipitation 0.1 43200 > th dose independent rect. 7 3
143 23.02 precipitation 0.1 43200 < th dose independent rect. 7 3
145 23.02 precipitation 0.1 43200 > th dose dependent rect. 7 3
146 23.02 precipitation 0.1 43200 < th dose dependent rect. 7 3
152 23.02 wind 1.0 43200 > th dose dependent rect. 23 9
159 23.04 wind 1.0 43200 > th dose dependent rect. 1 7
161 23.05 temperature 20.0 14400 > th dose dependent rect. 13 1
164 23.05 temperature 25.0 270 < th dose dependent rect. 7 22
177 23.09 humidity 90.0 14400 > th dose dependent rect. 2 8
181 23.10 wind 9.0 43200 < th dose dependent rect. 3 9
192 23.11 humidity 90.0 14400 > th dose dependent rect. 15 14
201 23.13 radiation 1.0 14400 < th dose dependent rect. 7 1
208 23.13 humidity 90.0 14400 > th dose dependent rect. 13 16
209 23.14 wind 9.0 43200 < th dose independent rect. 18 1
231 23.17 humidity 90.0 43200 > th dose independent rect. 9 2
243 23.18 wind 1.0 43200 > th dose dependent rect. 3 10
251 23.19 temperature 25.0 720 < th dose dependent rect. 7 19
257 23.20 wind 1.0 43200 > th dose dependent rect. 4 8
298 23.24 humidity 90.0 14400 > th dose dependent rect. 1 12
301 23.25 precipitation 0.1 43200 > th dose dependent rect. 5 5
309 23.25 humidity 90.0 14400 > th dose dependent rect. 18 16
313 23.26 wind 7.0 43200 > th dose dependent rect. 10 3
326 23.27 precipitation 0.1 43200 > th dose independent rect. 5 5
338 23.28 precipitation 0.1 43200 < th dose independent rect. 5 5
339 23.28 precipitation 0.1 43200 < th dose dependent rect. 5 5
347 23.29 temperature 25.0 43200 > th dose independent rect. 12 1
348 23.29 temperature 15.0 14400 > th dose dependent rect. 8 1
358 23.30 humidity 90.0 14400 > th dose dependent sin 7 NA
359 23.30 humidity 90.0 14400 > th dose dependent sin 13 NA
369 23.30 wind 1.0 43200 > th dose dependent rect. 1 12
375 23.31 wind 5.0 14400 < th dose independent rect. 14 1
376 23.31 temperature 25.0 43200 < th dose independent rect. 13 1
416 23.33 temperature 30.0 14400 < th dose dependent rect. 8 1
440 23.34 temperature 25.0 1440 < th dose dependent rect. 17 5
457 23.35 humidity 80.0 14400 < th dose independent rect. 13 2
478 23.36 temperature 20.0 43200 < th dose independent rect. 21 1
528 23.38 temperature 20.0 43200 > th dose independent rect. 20 1
530 23.38 temperature 25.0 1440 < th dose dependent sin 16 NA
545 23.38 temperature 25.0 1440 < th dose dependent rect. 15 12
588 23.39 temperature 25.0 1440 < th dose dependent rect. 15 21
590 23.39 temperature 25.0 270 < th dose dependent rect. 13 22
597 23.40 humidity 90.0 43200 < th dose dependent rect. 10 2
627 23.41 temperature 25.0 1440 < th dose dependent rect. 21 1
674 23.42 wind 7.0 43200 > th dose independent rect. 10 2
680 23.42 wind 7.0 43200 > th dose independent rect. 8 5
713 23.42 temperature 25.0 1440 < th dose dependent rect. 1 22
720 23.43 wind 5.0 14400 > th dose independent rect. 14 1
725 23.43 temperature 25.0 270 < th dose dependent no NA NA
726 23.43 temperature 25.0 1440 < th dose dependent no NA NA
761 23.43 temperature 25.0 270 < th dose dependent rect. 19 23
763 23.44 wind 7.0 43200 < th dose independent rect. 8 5
842 23.45 temperature 25.0 1440 < th dose dependent rect. 20 23
853 23.46 humidity 90.0 43200 < th dose dependent rect. 8 4
874 23.46 humidity 90.0 14400 > th dose dependent rect. 24 21
991 23.49 humidity 70.0 43200 < th dose dependent rect. 20 19