Os12g0602200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0602200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 382.22 | 0.919 | 3.08 | -0.882 | 0.0531 | 0.424 | -0.941 | -1.2 | -0.146 | 3.94 | 1005 | 178 | -- | -- |
| 388.11 | 0.918 | 3.09 | -0.921 | 0.062 | 0.428 | -0.928 | -- | -0.185 | 4.05 | 1005 | 90 | -- | -- |
| 384.48 | 0.913 | 3.1 | -0.898 | 0.118 | 0.4 | -- | -1.04 | -0.16 | 6.53 | 1005 | 165 | -- | -- |
| 389.17 | 0.919 | 3.08 | -0.86 | 0.154 | 0.455 | -- | -- | -0.178 | 6.9 | 1005 | 52 | -- | -- |
| 384.91 | 0.914 | 3.08 | -0.868 | -- | 0.421 | -- | -1.22 | -0.14 | -- | 1005 | 175 | -- | -- |
| 400.97 | 0.939 | 3.12 | -0.945 | 0.00665 | -- | -0.936 | -- | -0.313 | 3.46 | -- | -- | -- | -- |
| 402.84 | 0.94 | 3.11 | -0.929 | 0.123 | -- | -- | -- | -0.309 | 9.03 | -- | -- | -- | -- |
| 390.02 | 0.92 | 3.08 | -0.917 | -- | 0.432 | -- | -- | -0.172 | -- | 1005 | 55 | -- | -- |
| 411.43 | 0.945 | 3.07 | -- | 0.126 | 0.443 | -- | -- | -0.0836 | 6.85 | 1005 | 55 | -- | -- |
| 403.71 | 0.939 | 3.11 | -0.929 | -- | -- | -- | -- | -0.308 | -- | -- | -- | -- | -- |
| 425.57 | 0.965 | 3.09 | -- | 0.123 | -- | -- | -- | -0.205 | 9.6 | -- | -- | -- | -- |
| 412.19 | 0.946 | 3.06 | -- | -- | 0.441 | -- | -- | -0.0669 | -- | 1005 | 55 | -- | -- |
| 426.46 | 0.964 | 3.09 | -- | -- | -- | -- | -- | -0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 375.51 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 30 | 376.99 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 14 |
| 31 | 377.67 | wind | 7 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 35 | 377.78 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 13 | 20 |
| 37 | 378.12 | wind | 7 | 10 | > th | dose independent | rect. | 12 | 1 |
| 39 | 378.75 | wind | 9 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 41 | 378.87 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 92 | 380.55 | radiation | 1 | 720 | < th | dose independent | rect. | 16 | 15 |
| 107 | 381.03 | wind | 9 | 30 | > th | dose dependent | sin | 6 | NA |
| 130 | 381.52 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 19 | 16 |
| 146 | 381.74 | wind | 1 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 153 | 381.94 | wind | 7 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 164 | 382.26 | wind | 3 | 720 | > th | dose independent | rect. | 4 | 1 |
| 165 | 382.27 | wind | 7 | 720 | > th | dose independent | rect. | 4 | 4 |
| 174 | 382.35 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 9 | 19 |
| 179 | 382.49 | wind | 1 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 180 | 382.50 | humidity | 90 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 189 | 382.69 | wind | 9 | 270 | > th | dose independent | rect. | 9 | 1 |
| 197 | 382.70 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 17 | 11 |
| 233 | 382.97 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 8 | 22 |
| 236 | 382.98 | wind | 3 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 248 | 383.13 | wind | 1 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 254 | 383.18 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 11 | 17 |
| 255 | 383.19 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 13 | 15 |
| 261 | 383.28 | atmosphere | 1005 | 270 | < th | dose independent | sin | 14 | NA |
| 268 | 383.34 | radiation | 1 | 720 | > th | dose independent | sin | 12 | NA |
| 270 | 383.35 | atmosphere | 1005 | 270 | > th | dose independent | sin | 15 | NA |
| 272 | 383.36 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 18 | 22 |
| 278 | 383.45 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 280 | 383.46 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 14 | 21 |
| 292 | 383.55 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 13 | 20 |
| 344 | 383.96 | wind | 3 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 351 | 384.02 | atmosphere | 1005 | 90 | < th | dose independent | sin | 11 | NA |
| 384 | 384.15 | atmosphere | 1005 | 90 | > th | dose independent | sin | 12 | NA |
| 385 | 384.15 | humidity | 90 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 435 | 384.43 | radiation | 1 | 720 | > th | dose independent | rect. | 4 | 3 |
| 441 | 384.43 | radiation | 1 | 720 | < th | dose independent | rect. | 23 | 8 |
| 448 | 384.44 | wind | 7 | 720 | > th | dose independent | rect. | 24 | 10 |
| 450 | 384.44 | wind | 1 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 451 | 384.45 | wind | 9 | 30 | < th | dose independent | sin | 6 | NA |
| 453 | 384.45 | wind | 7 | 1440 | < th | dose independent | rect. | 20 | 14 |
| 455 | 384.46 | radiation | 1 | 720 | < th | dose independent | sin | 12 | NA |
| 457 | 384.46 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 2 | 23 |
| 484 | 384.59 | wind | 1 | 720 | > th | dose independent | rect. | 1 | 10 |
| 550 | 384.92 | wind | 5 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 557 | 384.96 | wind | 7 | 1440 | > th | dose independent | rect. | 20 | 14 |
| 559 | 384.97 | wind | 5 | 720 | < th | dose independent | rect. | 3 | 5 |
| 566 | 384.99 | wind | 5 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 599 | 385.09 | wind | 3 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 604 | 385.14 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 630 | 385.23 | wind | 5 | 1440 | > th | dose dependent | rect. | 20 | 13 |
| 633 | 385.26 | wind | 5 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 665 | 385.36 | wind | 7 | 1440 | > th | dose independent | rect. | 18 | 16 |
| 685 | 385.41 | wind | 1 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 687 | 385.41 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 19 | 12 |
| 688 | 385.42 | wind | 5 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 692 | 385.42 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 701 | 385.45 | wind | 3 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 710 | 385.49 | atmosphere | 1005 | 90 | < th | dose independent | no | NA | NA |
| 713 | 385.50 | wind | 5 | 1440 | < th | dose independent | rect. | 20 | 4 |
| 720 | 385.52 | wind | 1 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 730 | 385.57 | wind | 7 | 1440 | < th | dose independent | rect. | 18 | 16 |
| 731 | 385.57 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 23 | 23 |
| 738 | 385.59 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 6 |
| 786 | 385.64 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 791 | 385.66 | wind | 7 | 1440 | > th | dose independent | sin | 10 | NA |
| 830 | 385.72 | wind | 5 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 892 | 385.87 | wind | 7 | 1440 | < th | dose independent | sin | 10 | NA |
| 924 | 385.95 | wind | 1 | 4320 | < th | dose independent | rect. | 21 | 7 |
| 959 | 386.06 | wind | 1 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 971 | 386.09 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 22 | 23 |
| 986 | 386.13 | wind | 9 | 30 | > th | dose independent | sin | 5 | NA |
| 1000 | 386.18 | atmosphere | 1005 | 90 | > th | dose independent | no | NA | NA |