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Os12g0601600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.16 (0.0318) R2 : 0.569
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.94 (0.129) R2dC : 1.43 R2C : -0.803
β3 : -3.01 (0.137) R2dE : 1.33 R2E : -0.872
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.284 (0.0667) R2dN8 : 0.022 R2N8 : 0.0293
σ : 0.592
deviance : 161.7
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_____
C
peak time of C : 10.6
E
wheather : temperature
threshold : 3.966
memory length : 276
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.02
open length of G : 9.82

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.54 0.52 6.17 -0.362 2.36 -2.57 -3.57 1.49 -0.33 10.7 4.432 249 1.09 9.43
124.16 0.519 6.17 -0.408 2.43 -2.52 -2.84 -- -0.334 10.7 1.949 244 1.18 9.53
138.64 0.548 6.21 -0.679 2.79 -2.64 -- -2.46 -0.44 10.7 -5.235 277 0.934 10.1
153.31 0.577 6.18 -0.573 2.87 -2.89 -- -- -0.357 10.6 0.6978 277 1.03 9.77
270 0.769 6.24 -0.795 -- -0.997 -- -0.378 -0.342 -- -5.235 277 0.934 10.1
178.44 0.626 6.27 -0.71 1.61 -- -2.17 -- -0.47 14.9 -- -- -- --
192.55 0.65 6.28 -0.759 1.63 -- -- -- -0.482 15.3 -- -- -- --
264.74 0.758 6.24 -0.756 -- -0.96 -- -- -0.391 -- -41.43 92 0.567 9.89
161.7 0.592 6.16 -- 2.94 -3.01 -- -- -0.284 10.6 3.966 276 1.02 9.82
341.88 0.864 6.28 -0.828 -- -- -- -- -0.524 -- -- -- -- --
207.73 0.674 6.26 -- 1.64 -- -- -- -0.397 15.3 -- -- -- --
280.11 0.78 6.24 -- -- -0.956 -- -- -0.336 -- -54.02 87 0.667 9.8
359.95 0.886 6.26 -- -- -- -- -- -0.433 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 126.42 temperature 15.0 270 > th dose independent rect. 1 10
2 126.77 temperature 10.0 270 > th dose dependent rect. 1 9
4 128.50 wind 7.0 270 < th dose independent rect. 1 10
5 128.50 precipitation 0.1 270 < th dose independent rect. 1 10
6 128.50 precipitation 0.1 270 < th dose dependent rect. 1 10
8 129.49 temperature 30.0 720 < th dose dependent rect. 5 2
10 129.76 atmosphere 995.0 270 > th dose independent rect. 1 10
11 129.76 atmosphere 1015.0 270 < th dose independent rect. 1 10
12 129.76 temperature 10.0 270 > th dose independent rect. 11 14
13 129.84 humidity 50.0 270 > th dose independent rect. 1 10
14 130.39 wind 9.0 270 < th dose independent rect. 11 14
15 131.19 temperature 30.0 90 < th dose independent rect. 23 17
20 132.28 precipitation 0.1 270 < th dose independent rect. 11 14
21 132.28 precipitation 0.1 270 < th dose dependent rect. 11 14
24 132.58 temperature 30.0 270 < th dose independent rect. 21 18
33 133.53 temperature 30.0 90 < th dose independent rect. 11 6
47 135.35 atmosphere 995.0 270 > th dose independent rect. 11 14
49 135.68 temperature 30.0 90 < th dose independent rect. 9 8
50 135.75 radiation 40.0 30 < th dose dependent rect. 17 18
52 136.03 temperature 30.0 90 < th dose independent rect. 21 20
57 136.29 radiation 30.0 270 < th dose independent rect. 14 7
66 136.85 wind 1.0 270 > th dose independent rect. 11 14
69 136.92 temperature 30.0 30 < th dose independent rect. 6 11
70 136.97 temperature 20.0 720 < th dose independent rect. 4 1
71 137.01 radiation 20.0 270 < th dose independent rect. 15 17
74 137.24 precipitation 0.1 270 < th dose independent rect. 16 17
75 137.24 precipitation 0.1 270 < th dose dependent rect. 16 17
77 137.41 temperature 10.0 270 > th dose independent rect. 9 7
78 137.41 atmosphere 1015.0 270 < th dose independent rect. 9 7
79 137.41 temperature 10.0 270 > th dose independent rect. 16 17
87 137.62 radiation 40.0 270 < th dose dependent rect. 14 7
88 137.68 radiation 40.0 270 < th dose dependent rect. 15 18
92 137.78 humidity 50.0 270 > th dose independent rect. 16 17
94 137.83 atmosphere 995.0 270 > th dose independent rect. 9 7
95 137.84 radiation 40.0 270 < th dose independent rect. 16 17
96 137.91 wind 1.0 270 > th dose independent rect. 9 7
98 138.00 precipitation 0.1 270 < th dose independent rect. 9 7
99 138.00 precipitation 0.1 270 < th dose dependent rect. 9 7
101 138.03 wind 9.0 270 < th dose dependent rect. 1 10
107 138.19 temperature 25.0 720 < th dose independent rect. 5 3
117 138.43 temperature 30.0 270 < th dose independent rect. 1 9
121 138.71 wind 9.0 270 < th dose independent rect. 16 17
127 138.75 humidity 50.0 270 > th dose independent rect. 14 7
131 138.84 humidity 50.0 270 > th dose independent rect. 21 18
135 138.88 temperature 10.0 270 > th dose independent rect. 15 6
137 138.88 temperature 10.0 270 > th dose independent rect. 21 18
143 138.90 atmosphere 995.0 270 > th dose independent rect. 21 17
144 138.91 atmosphere 995.0 270 > th dose independent rect. 16 17
147 138.96 atmosphere 1015.0 270 < th dose independent rect. 10 15
148 138.97 wind 1.0 270 > th dose independent rect. 14 7
150 138.98 precipitation 0.1 270 < th dose independent rect. 15 6
151 138.98 precipitation 0.1 270 < th dose dependent rect. 15 6
157 139.04 precipitation 0.1 270 < th dose independent rect. 21 18
158 139.04 precipitation 0.1 270 < th dose dependent rect. 21 18
175 139.25 humidity 50.0 270 > th dose independent rect. 9 7
183 139.35 radiation 30.0 10 < th dose independent rect. 17 18
184 139.36 wind 9.0 270 < th dose independent rect. 9 7
192 139.45 atmosphere 995.0 270 > th dose independent rect. 15 6
226 139.88 temperature 25.0 720 < th dose independent rect. 4 7
227 139.88 temperature 25.0 720 < th dose independent rect. 3 9
231 139.92 radiation 20.0 90 < th dose dependent rect. 16 7
248 140.06 atmosphere 1015.0 270 < th dose independent rect. 15 6
250 140.07 wind 9.0 270 < th dose independent rect. 14 7
263 140.13 temperature 30.0 10 < th dose dependent rect. 6 11
305 140.62 wind 9.0 270 < th dose dependent rect. 11 14
321 140.90 wind 9.0 270 < th dose independent rect. 21 17
334 141.01 wind 1.0 90 > th dose independent rect. 23 18
357 141.26 temperature 30.0 720 < th dose dependent sin 7 NA
364 141.30 atmosphere 1015.0 270 < th dose independent rect. 21 17
366 141.31 wind 1.0 30 > th dose independent rect. 6 11
368 141.31 wind 1.0 270 > th dose independent rect. 21 18
375 141.37 humidity 50.0 90 > th dose independent rect. 17 6
377 141.40 precipitation 0.1 90 < th dose independent rect. 23 18
379 141.40 precipitation 0.1 90 < th dose dependent rect. 23 18
400 141.60 temperature 10.0 90 > th dose independent rect. 17 6
404 141.60 temperature 10.0 90 > th dose independent rect. 23 18
410 141.64 atmosphere 995.0 90 > th dose independent rect. 17 6
415 141.70 precipitation 0.1 90 < th dose independent rect. 17 6
416 141.70 precipitation 0.1 90 < th dose dependent rect. 17 6
422 141.78 radiation 40.0 270 < th dose independent rect. 1 9
430 141.83 atmosphere 995.0 90 > th dose independent rect. 23 18
440 141.88 wind 1.0 90 > th dose independent rect. 17 6
442 141.92 radiation 30.0 30 < th dose dependent rect. 17 13
452 142.00 humidity 50.0 30 > th dose independent rect. 17 13
456 142.04 temperature 10.0 90 > th dose independent rect. 11 6
457 142.04 atmosphere 1015.0 90 < th dose independent rect. 11 6
483 142.14 temperature 10.0 10 > th dose dependent rect. 2 11
491 142.18 temperature 30.0 90 < th dose independent rect. 17 6
492 142.18 temperature 10.0 1440 > th dose independent rect. 7 11
495 142.18 temperature 10.0 1440 > th dose independent rect. 18 13
498 142.18 humidity 50.0 1440 > th dose independent rect. 18 13
500 142.18 radiation 40.0 1440 < th dose independent rect. 18 13
512 142.21 temperature 30.0 720 < th dose dependent rect. 21 11
517 142.29 temperature 30.0 270 < th dose dependent rect. 22 16
520 142.30 precipitation 0.1 90 < th dose independent rect. 11 6
522 142.30 precipitation 0.1 90 < th dose dependent rect. 11 6
528 142.35 temperature 30.0 10 < th dose independent rect. 17 13
545 142.43 wind 1.0 90 > th dose independent rect. 11 6
551 142.45 temperature 30.0 720 < th dose dependent rect. 20 15
563 142.51 atmosphere 1015.0 90 < th dose independent rect. 23 18
570 142.54 temperature 10.0 30 > th dose independent rect. 6 11
572 142.54 atmosphere 1015.0 30 < th dose independent rect. 6 11
573 142.54 temperature 10.0 30 > th dose independent rect. 17 13
574 142.54 radiation 20.0 30 < th dose independent rect. 17 13
579 142.55 precipitation 0.1 720 < th dose independent rect. 7 22
581 142.55 precipitation 0.1 720 < th dose dependent rect. 7 22
582 142.56 radiation 40.0 90 < th dose independent rect. 12 15
587 142.58 precipitation 0.1 30 < th dose independent rect. 6 11
588 142.58 precipitation 0.1 30 < th dose dependent rect. 6 11
592 142.60 radiation 10.0 30 < th dose dependent sin 17 NA
597 142.62 precipitation 0.1 30 < th dose independent rect. 17 13
601 142.62 precipitation 0.1 30 < th dose dependent rect. 17 13
604 142.63 atmosphere 995.0 30 > th dose independent rect. 17 13
654 142.83 wind 9.0 90 < th dose independent rect. 17 6
663 142.87 atmosphere 995.0 270 > th dose dependent rect. 14 7
665 142.89 atmosphere 995.0 30 > th dose independent rect. 6 11
673 142.92 humidity 50.0 30 > th dose independent rect. 6 11
710 143.05 atmosphere 995.0 90 > th dose independent rect. 11 6
755 143.23 precipitation 0.1 10 < th dose independent rect. 24 17
758 143.23 precipitation 0.1 10 < th dose dependent rect. 24 17
766 143.26 temperature 15.0 10 > th dose independent rect. 17 7
767 143.26 wind 9.0 30 < th dose independent rect. 17 13
769 143.27 wind 5.0 720 < th dose independent rect. 5 2
777 143.29 temperature 30.0 270 < th dose independent rect. 15 6
782 143.30 radiation 1.0 720 < th dose dependent rect. 20 18
797 143.35 humidity 50.0 10 > th dose independent rect. 17 7
824 143.44 atmosphere 1015.0 90 < th dose independent rect. 17 6
831 143.48 radiation 20.0 10 < th dose dependent rect. 17 7
835 143.50 temperature 30.0 270 < th dose independent rect. 16 16
842 143.54 radiation 1.0 90 > th dose independent sin 22 NA
850 143.57 temperature 30.0 10 < th dose independent rect. 17 7
867 143.62 atmosphere 995.0 10 > th dose dependent rect. 24 17
902 143.81 radiation 10.0 270 < th dose dependent rect. 17 1
904 143.83 radiation 20.0 10 < th dose independent rect. 17 7
907 143.83 precipitation 0.1 10 < th dose independent rect. 17 7
908 143.83 temperature 10.0 10 > th dose independent rect. 24 17
909 143.83 precipitation 0.1 10 < th dose dependent rect. 17 7
923 143.87 atmosphere 995.0 10 > th dose independent rect. 17 7
926 143.89 humidity 50.0 270 > th dose dependent rect. 15 5
936 143.93 radiation 10.0 90 < th dose independent sin 17 NA
944 143.97 atmosphere 1015.0 10 < th dose independent rect. 24 17
949 143.99 atmosphere 995.0 10 > th dose independent rect. 24 17
959 144.02 humidity 50.0 270 > th dose independent rect. 17 1
961 144.03 temperature 30.0 270 < th dose independent rect. 16 4
995 144.20 humidity 50.0 10 > th dose dependent rect. 17 18