Os12g0601500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0601500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.18 | 0.572 | 2.93 | -0.323 | 0.131 | -10.3 | -0.344 | 35.1 | -0.0776 | 7.28 | 1.723 | 6 | -- | -- |
| 163.02 | 0.599 | 2.9 | -0.284 | 0.189 | 0.161 | -0.513 | -- | -0.109 | 5.97 | 1.723 | 6 | -- | -- |
| 148.49 | 0.568 | 2.93 | -0.331 | 0.131 | -10.4 | -- | 35.2 | -0.0771 | 6.93 | 4.073 | 5 | -- | -- |
| 163.27 | 0.595 | 2.9 | -0.298 | 0.181 | -0.635 | -- | -- | -0.104 | 6.27 | 2.713 | 5 | -- | -- |
| 149.38 | 0.569 | 2.93 | -0.329 | -- | -10.6 | -- | 35.9 | -0.074 | -- | 6.313 | 5 | -- | -- |
| 163.05 | 0.599 | 2.9 | -0.286 | 0.188 | -- | -0.521 | -- | -0.109 | 5.97 | -- | -- | -- | -- |
| 163.71 | 0.599 | 2.9 | -0.29 | 0.186 | -- | -- | -- | -0.107 | 6.16 | -- | -- | -- | -- |
| 164.97 | 0.598 | 2.91 | -0.295 | -- | -0.692 | -- | -- | -0.0998 | -- | 2.836 | 5 | -- | -- |
| 165.61 | 0.599 | 2.89 | -- | 0.178 | -0.534 | -- | -- | -0.071 | 6.33 | 2.898 | 5 | -- | -- |
| 165.5 | 0.601 | 2.91 | -0.285 | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
| 165.92 | 0.603 | 2.9 | -- | 0.182 | -- | -- | -- | -0.0744 | 6.24 | -- | -- | -- | -- |
| 167.25 | 0.602 | 2.9 | -- | -- | -0.592 | -- | -- | -0.0676 | -- | 2.923 | 5 | -- | -- |
| 167.63 | 0.604 | 2.9 | -- | -- | -- | -- | -- | -0.071 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.90 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 3 | 139.81 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 6 | 141.26 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 21 |
| 8 | 141.26 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 10 | 141.55 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 28 | 145.19 | precipitation | 0.1 | 10 | > th | dose independent | sin | 2 | NA |
| 29 | 145.19 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 2 | NA |
| 30 | 145.27 | precipitation | 0.1 | 10 | < th | dose independent | sin | 2 | NA |
| 31 | 145.27 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 2 | NA |
| 43 | 145.90 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 13 |
| 45 | 145.90 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 53 | 146.04 | wind | 1.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 57 | 146.18 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 17 |
| 61 | 146.18 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 72 | 146.44 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 73 | 146.47 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 10 |
| 77 | 146.47 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 78 | 146.47 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 4 | 10 |
| 82 | 146.48 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 3 |
| 83 | 146.48 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 93 | 146.48 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 96 | 146.48 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 123 | 146.50 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 134 | 146.50 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 174 | 146.53 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 188 | 146.53 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 204 | 146.59 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 249 | 146.94 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 7 |
| 271 | 146.94 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 291 | 146.95 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 5 |
| 298 | 146.95 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 5 |
| 305 | 147.04 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 413 | 147.98 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 19 |
| 415 | 147.98 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 421 | 148.00 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 1 |
| 431 | 148.20 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 4 |
| 432 | 148.21 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 461 | 148.79 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 489 | 149.36 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 533 | 149.98 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 1 |
| 559 | 150.30 | radiation | 1.0 | 30 | < th | dose independent | rect. | 5 | 13 |
| 565 | 150.36 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 13 |
| 585 | 150.37 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 588 | 150.38 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 589 | 150.39 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 590 | 150.39 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 641 | 150.39 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 694 | 150.81 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 13 |
| 714 | 150.82 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 766 | 150.87 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 23 |
| 767 | 150.87 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 919 | 151.62 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 927 | 151.71 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 928 | 151.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 23 |
| 932 | 151.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 933 | 151.72 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 935 | 151.72 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 938 | 151.72 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 942 | 151.72 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 947 | 151.72 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 960 | 151.83 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 962 | 151.86 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 23 |
| 984 | 151.99 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 994 | 151.99 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |