Os12g0592200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0592200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.95 | 0.508 | 7.22 | 1.29 | 1.51 | -1.13 | -0.204 | 0.833 | 0.068 | 17.9 | 9.433 | 756 | -- | -- |
| 117.48 | 0.505 | 7.24 | 1.14 | 1.51 | -1.11 | -0.131 | -- | 0.0256 | 17.9 | 7.883 | 758 | -- | -- |
| 117.05 | 0.504 | 7.22 | 1.27 | 1.51 | -1.13 | -- | 0.744 | 0.0641 | 17.9 | 8.899 | 757 | -- | -- |
| 117.5 | 0.505 | 7.24 | 1.14 | 1.51 | -1.12 | -- | -- | 0.0274 | 17.9 | 6.808 | 758 | -- | -- |
| 203.97 | 0.665 | 7.18 | 1.3 | -- | -1.18 | -- | 0.644 | 0.0692 | -- | 4.579 | 1271 | -- | -- |
| 133.52 | 0.542 | 7.27 | 0.847 | 1.34 | -- | -0.208 | -- | -0.145 | 17.4 | -- | -- | -- | -- |
| 133.62 | 0.541 | 7.27 | 0.848 | 1.34 | -- | -- | -- | -0.146 | 17.4 | -- | -- | -- | -- |
| 204.32 | 0.666 | 7.2 | 1.16 | -- | -1.17 | -- | -- | 0.0322 | -- | 8.472 | 1273 | -- | -- |
| 147.37 | 0.565 | 7.28 | -- | 1.48 | -0.632 | -- | -- | -0.162 | 17.6 | 5.618 | 530 | -- | -- |
| 227.56 | 0.705 | 7.25 | 0.803 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 152.57 | 0.578 | 7.29 | -- | 1.33 | -- | -- | -- | -0.241 | 17.4 | -- | -- | -- | -- |
| 235.41 | 0.715 | 7.25 | -- | -- | -0.685 | -- | -- | -0.168 | -- | 6.934 | 1263 | -- | -- |
| 244.55 | 0.73 | 7.27 | -- | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 4 | 115.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 8 | 115.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 9 | 115.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 34 | 116.13 | temperature | 20 | 720 | > th | dose dependent | sin | 10 | NA |
| 56 | 116.42 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 61 | 116.53 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 63 | 116.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 65 | 116.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 67 | 116.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 70 | 116.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 74 | 116.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 76 | 116.62 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 77 | 116.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 81 | 116.67 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 87 | 116.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 22 |
| 89 | 116.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 96 | 116.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 97 | 116.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 99 | 116.78 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 109 | 116.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 110 | 116.82 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 127 | 116.89 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 144 | 116.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 147 | 116.99 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 163 | 117.07 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 174 | 117.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 197 | 117.23 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 205 | 117.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 206 | 117.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 213 | 117.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 20 |
| 224 | 117.32 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 229 | 117.35 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 252 | 117.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 289 | 117.51 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 296 | 117.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 300 | 117.53 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 313 | 117.56 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |
| 349 | 117.65 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 396 | 117.75 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 399 | 117.77 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 403 | 117.79 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 404 | 117.79 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 410 | 117.80 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 468 | 117.94 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 6 |
| 499 | 117.98 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 510 | 118.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 511 | 118.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 539 | 118.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 549 | 118.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 554 | 118.07 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 572 | 118.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 588 | 118.11 | temperature | 25 | 4320 | > th | dose dependent | sin | 6 | NA |
| 603 | 118.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 617 | 118.14 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 665 | 118.20 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 15 |
| 668 | 118.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 744 | 118.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 15 |
| 754 | 118.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 762 | 118.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 770 | 118.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 872 | 118.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 883 | 118.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 956 | 118.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 975 | 118.46 | temperature | 20 | 4320 | > th | dose dependent | rect. | 12 | 16 |
| 998 | 118.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 13 |