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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0591600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.34 (0.0249) R2 : 0.00679
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0927 (0.0525) R2dN8 : 0.00876 R2N8 : 0.00679
σ : 0.47
deviance : 101.25
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.54 0.459 3.36 0.209 0.168 0.28 -0.192 1.34 0.0626 5.66 91 5890 -- --
98.02 0.461 3.35 0.112 0.181 0.321 -0.247 -- 0.0354 5.28 91.99 4508 -- --
95.61 0.455 3.36 0.21 0.168 0.278 -- 1.35 0.0636 6.08 91 5903 -- --
98.13 0.461 3.35 0.122 0.209 0.331 -- -- 0.0403 5.93 92 4997 -- --
97.06 0.459 3.36 0.213 -- 0.278 -- 1.35 0.0708 -- 91 5827 -- --
99.42 0.467 3.34 0.0972 0.168 -- -0.224 -- 0.099 5.52 -- -- -- --
99.52 0.467 3.34 0.0969 0.168 -- -- -- 0.1 6 -- -- -- --
99.55 0.465 3.35 0.14 -- 0.309 -- -- 0.0416 -- 92 5572 -- --
98.43 0.462 3.35 -- 0.198 0.319 -- -- 0.0313 6.49 91 5101 -- --
100.98 0.47 3.34 0.102 -- -- -- -- 0.104 -- -- -- -- --
99.76 0.467 3.34 -- 0.17 -- -- -- 0.0894 5.97 -- -- -- --
99.91 0.466 3.36 -- -- 0.312 -- -- 0.0274 -- 89 5616 -- --
101.25 0.47 3.34 -- -- -- -- -- 0.0927 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.12 atmosphere 1000.0 30 > th dose independent rect. 3 23
2 90.26 atmosphere 1005.0 90 > th dose dependent rect. 2 1
5 90.75 atmosphere 1005.0 10 > th dose dependent rect. 2 2
6 90.85 radiation 1.0 43200 < th dose dependent rect. 3 1
9 91.35 atmosphere 1010.0 30 < th dose dependent rect. 2 1
10 91.43 temperature 25.0 90 > th dose independent rect. 1 1
12 91.44 wind 3.0 30 < th dose independent rect. 2 1
15 91.46 wind 5.0 30 < th dose dependent rect. 2 1
18 91.46 temperature 20.0 30 > th dose dependent rect. 2 1
21 91.47 temperature 10.0 30 > th dose dependent rect. 2 1
25 91.48 temperature 10.0 30 > th dose independent rect. 2 1
27 91.48 temperature 30.0 30 < th dose independent rect. 2 1
28 91.48 humidity 50.0 30 > th dose independent rect. 2 1
31 91.48 humidity 90.0 30 > th dose independent rect. 2 1
32 91.48 atmosphere 995.0 30 > th dose independent rect. 2 1
33 91.48 atmosphere 1010.0 30 < th dose independent rect. 2 1
35 91.48 radiation 1.0 30 < th dose independent rect. 2 1
40 91.48 precipitation 0.1 30 < th dose independent rect. 2 1
42 91.48 temperature 10.0 30 > th dose independent rect. 3 23
44 91.48 humidity 50.0 30 > th dose dependent rect. 2 1
48 91.48 radiation 1.0 30 < th dose dependent rect. 2 1
53 91.48 precipitation 0.1 30 < th dose dependent rect. 2 1
62 91.51 temperature 30.0 30 < th dose dependent rect. 2 1
64 91.52 atmosphere 1005.0 30 > th dose independent rect. 2 1
68 91.53 wind 1.0 30 > th dose independent rect. 2 1
75 91.55 temperature 25.0 90 > th dose dependent rect. 1 3
118 91.71 precipitation 0.1 30 < th dose independent rect. 3 23
120 91.71 precipitation 0.1 30 < th dose dependent rect. 3 23
133 91.76 wind 9.0 1440 < th dose independent rect. 3 1
134 91.76 temperature 10.0 1440 > th dose independent rect. 3 1
137 91.76 temperature 30.0 1440 < th dose independent rect. 3 1
141 91.76 humidity 50.0 1440 > th dose independent rect. 3 1
150 91.76 atmosphere 995.0 1440 > th dose independent rect. 3 1
151 91.76 radiation 1.0 1440 < th dose independent rect. 3 1
171 91.76 temperature 10.0 1440 > th dose independent rect. 4 23
181 91.85 wind 9.0 30 < th dose independent rect. 3 23
188 92.00 precipitation 0.1 720 < th dose independent rect. 15 8
189 92.00 precipitation 0.1 720 < th dose dependent rect. 15 8
197 92.28 atmosphere 995.0 720 > th dose independent rect. 23 16
201 92.45 temperature 10.0 720 > th dose independent rect. 15 8
202 92.45 temperature 10.0 720 > th dose independent rect. 23 16
203 92.47 temperature 25.0 30 > th dose dependent rect. 20 3
208 92.67 temperature 10.0 720 > th dose independent rect. 3 8
209 92.67 atmosphere 995.0 720 > th dose independent rect. 3 8
210 92.67 temperature 10.0 720 > th dose independent rect. 11 16
213 92.78 precipitation 0.1 720 < th dose independent rect. 11 16
214 92.78 precipitation 0.1 720 < th dose dependent rect. 11 16
216 92.83 wind 9.0 720 < th dose independent rect. 3 8
217 92.85 humidity 50.0 30 > th dose independent rect. 3 23
220 92.87 atmosphere 1000.0 10 > th dose independent rect. 21 23
221 92.91 humidity 50.0 720 > th dose independent rect. 3 8
223 92.94 temperature 25.0 30 > th dose independent rect. 20 3
240 93.36 temperature 25.0 720 > th dose dependent rect. 3 5
243 93.41 radiation 40.0 720 < th dose independent rect. 15 8
269 93.48 atmosphere 1015.0 720 < th dose independent rect. 3 8
274 93.59 humidity 90.0 90 < th dose independent rect. 2 1
279 93.75 atmosphere 995.0 720 > th dose independent rect. 15 8
283 93.83 atmosphere 995.0 720 > th dose independent rect. 11 16
285 93.88 humidity 90.0 10 < th dose dependent rect. 20 1
286 93.90 temperature 25.0 720 > th dose independent rect. 3 6
287 93.90 humidity 80.0 14400 < th dose dependent rect. 4 5
304 94.08 atmosphere 1005.0 10 > th dose dependent rect. 20 3
306 94.10 humidity 90.0 10 < th dose independent rect. 20 1
315 94.19 temperature 20.0 10 > th dose independent rect. 20 1
316 94.19 temperature 15.0 30 > th dose independent rect. 21 23
318 94.20 radiation 10.0 43200 < th dose dependent rect. 21 1
319 94.21 atmosphere 1000.0 10 > th dose independent rect. 20 1
321 94.21 precipitation 0.1 720 < th dose independent rect. 3 8
322 94.21 temperature 30.0 30 < th dose dependent rect. 20 1
323 94.21 precipitation 0.1 720 < th dose dependent rect. 3 8
324 94.22 wind 1.0 10 > th dose independent rect. 20 1
325 94.22 wind 5.0 10 < th dose independent rect. 20 1
328 94.22 temperature 10.0 10 > th dose independent rect. 20 1
330 94.22 temperature 30.0 10 < th dose independent rect. 20 1
331 94.22 humidity 50.0 10 > th dose independent rect. 20 1
336 94.22 atmosphere 1010.0 10 < th dose independent rect. 20 1
338 94.22 radiation 1.0 10 < th dose independent rect. 20 1
343 94.22 precipitation 0.1 10 < th dose independent rect. 20 1
346 94.22 wind 9.0 10 < th dose dependent rect. 20 1
347 94.22 radiation 1.0 10 < th dose dependent rect. 20 1
352 94.22 precipitation 0.1 10 < th dose dependent rect. 20 1
355 94.23 atmosphere 995.0 10 > th dose dependent rect. 20 1
360 94.24 wind 9.0 30 < th dose independent rect. 21 23
361 94.24 atmosphere 1015.0 10 < th dose dependent rect. 20 1
389 94.25 wind 1.0 30 > th dose dependent rect. 20 1
392 94.25 temperature 10.0 10 > th dose dependent rect. 20 1
404 94.26 temperature 15.0 1440 > th dose independent rect. 21 1
418 94.27 humidity 50.0 30 > th dose dependent rect. 20 1
426 94.28 temperature 30.0 1440 < th dose independent rect. 21 1
430 94.28 humidity 50.0 1440 > th dose independent rect. 21 1
436 94.28 atmosphere 995.0 1440 > th dose independent rect. 21 1
437 94.28 radiation 1.0 1440 < th dose independent rect. 21 1
457 94.28 temperature 10.0 1440 > th dose independent rect. 22 23
473 94.31 wind 9.0 720 < th dose independent rect. 15 8
489 94.38 precipitation 0.1 720 < th dose independent rect. 23 16
490 94.38 precipitation 0.1 720 < th dose dependent rect. 23 16
492 94.40 humidity 70.0 14400 > th dose independent rect. 8 1
495 94.43 wind 1.0 14400 < th dose dependent rect. 6 1
514 94.54 precipitation 0.1 10 < th dose independent rect. 21 23
516 94.54 precipitation 0.1 10 < th dose dependent rect. 21 23
521 94.57 wind 1.0 10 > th dose independent rect. 21 23
524 94.64 humidity 70.0 14400 > th dose independent rect. 4 5
525 94.64 humidity 70.0 14400 > th dose independent rect. 24 9
540 94.67 humidity 70.0 14400 < th dose independent rect. 8 1
544 94.68 humidity 90.0 90 < th dose independent rect. 1 4
548 94.72 temperature 25.0 90 > th dose independent rect. 19 10
554 94.75 temperature 25.0 90 > th dose dependent rect. 19 10
557 94.78 atmosphere 1000.0 10 > th dose independent rect. 14 12
558 94.79 precipitation 0.1 1440 < th dose independent rect. 21 1
559 94.79 precipitation 0.1 1440 < th dose dependent rect. 21 1
573 94.89 wind 1.0 720 > th dose independent rect. 15 8
581 94.96 humidity 60.0 10 > th dose independent rect. 14 12
584 94.97 humidity 80.0 14400 < th dose dependent rect. 22 12
594 95.01 radiation 40.0 30 < th dose independent rect. 14 12
595 95.01 humidity 50.0 30 > th dose independent rect. 21 23
598 95.02 humidity 70.0 14400 < th dose independent rect. 21 12
622 95.07 wind 9.0 720 < th dose independent rect. 23 16
631 95.10 wind 1.0 14400 < th dose independent rect. 6 1
680 95.19 radiation 1.0 90 < th dose dependent rect. 1 23
681 95.20 wind 9.0 1440 < th dose independent rect. 21 1
692 95.28 radiation 10.0 10 < th dose independent rect. 3 23
698 95.30 humidity 90.0 720 < th dose independent rect. 1 3
704 95.32 atmosphere 1000.0 10 > th dose independent rect. 16 10
706 95.33 humidity 90.0 10 < th dose independent rect. 20 3
710 95.34 atmosphere 995.0 720 > th dose independent rect. 14 1
711 95.34 atmosphere 1000.0 10 > th dose independent rect. 2 12
713 95.34 wind 1.0 14400 < th dose dependent rect. 4 4
721 95.37 temperature 25.0 10 > th dose dependent rect. 20 9
722 95.38 atmosphere 995.0 720 > th dose independent rect. 3 23
733 95.41 humidity 70.0 4320 > th dose dependent rect. 3 8
734 95.43 wind 1.0 14400 > th dose independent rect. 5 2
738 95.44 temperature 10.0 30 > th dose dependent rect. 3 23
756 95.48 wind 1.0 14400 < th dose independent rect. 4 4
758 95.48 temperature 10.0 10 > th dose independent rect. 2 12
760 95.48 temperature 10.0 10 > th dose independent rect. 14 12
762 95.48 atmosphere 1015.0 10 < th dose independent rect. 2 12
769 95.50 precipitation 0.1 10 < th dose independent rect. 2 12
771 95.50 precipitation 0.1 10 < th dose dependent rect. 2 12
772 95.51 wind 1.0 14400 > th dose independent rect. 4 4
775 95.52 temperature 30.0 30 < th dose independent rect. 3 23
783 95.53 radiation 1.0 720 < th dose dependent rect. 18 9
786 95.54 wind 9.0 10 < th dose independent rect. 14 12
788 95.54 humidity 50.0 10 > th dose independent rect. 2 12
797 95.56 wind 5.0 14400 < th dose independent rect. 11 1
799 95.56 atmosphere 1000.0 10 > th dose independent rect. 23 21
804 95.57 precipitation 0.1 720 < th dose independent rect. 14 1
805 95.57 precipitation 0.1 720 < th dose dependent rect. 14 1
817 95.58 precipitation 0.1 10 < th dose independent rect. 14 12
823 95.58 precipitation 0.1 10 < th dose dependent rect. 14 12
824 95.59 humidity 90.0 720 > th dose independent rect. 3 1
828 95.60 wind 1.0 720 > th dose independent rect. 14 1
834 95.60 wind 9.0 720 < th dose dependent rect. 2 1
847 95.61 atmosphere 995.0 720 > th dose independent rect. 15 23
848 95.61 atmosphere 1015.0 30 < th dose independent rect. 3 23
878 95.62 radiation 1.0 30 < th dose dependent rect. 19 23
879 95.63 temperature 10.0 720 > th dose independent rect. 14 1
880 95.63 atmosphere 1015.0 720 < th dose independent rect. 14 1
901 95.63 temperature 10.0 720 > th dose independent rect. 15 23
916 95.64 temperature 10.0 1440 > th dose independent rect. 3 12
919 95.64 temperature 10.0 1440 > th dose independent rect. 15 12
942 95.67 precipitation 0.1 720 < th dose independent rect. 2 1
943 95.67 precipitation 0.1 720 < th dose dependent rect. 2 1
973 95.69 temperature 10.0 90 > th dose dependent rect. 3 16
974 95.69 humidity 90.0 4320 < th dose dependent rect. 23 16
975 95.70 temperature 25.0 720 > th dose independent rect. 8 1
980 95.70 temperature 25.0 30 > th dose independent rect. 23 20
982 95.70 humidity 90.0 90 < th dose independent rect. 1 22
988 95.70 humidity 90.0 4320 < th dose dependent rect. 3 12
998 95.71 radiation 40.0 10 < th dose dependent rect. 14 12