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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0588400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.36 (0.0312) R2 : 0.825
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.22 (0.0749) R2dC : 0.344 R2C : 0.415
β3 : 3.18 (0.0977) R2dE : 0.432 R2E : 0.446
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.57 (0.0674) R2dN8 : 0.0362 R2N8 : -0.0365
σ : 0.582
deviance : 155.94
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_____
C
peak time of C : 1.3
E
wheather : temperature
threshold : 21.06
memory length : 5511
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.2 0.576 6.34 -0.314 2.24 3.47 0.592 0.889 -0.613 1.24 19.29 5539 -- --
150.73 0.572 6.38 -0.513 2.24 3.45 0.622 -- -0.662 1.24 19.76 5518 -- --
151.27 0.573 6.34 -0.335 2.28 3.7 -- 1.59 -0.63 1.29 17.6 5546 -- --
152.13 0.574 6.37 -0.512 2.23 3.39 -- -- -0.66 1.22 20.03 5535 -- --
454.5 0.993 6.35 -0.447 -- 3.91 -- 1.59 -0.832 -- 18.02 6818 -- --
469.84 1.02 6.19 1.19 2.48 -- 0.896 -- 0.158 1.29 -- -- -- --
473.13 1.02 6.19 1.16 2.48 -- -- -- 0.153 1.3 -- -- -- --
399.95 0.931 6.33 -0.093 -- 3.61 -- -- -0.588 -- 22.2 2511 -- --
155.94 0.582 6.36 -- 2.22 3.18 -- -- -0.57 1.3 21.06 5511 -- --
851.5 1.36 6.16 1.25 -- -- -- -- 0.204 -- -- -- -- --
508.42 1.05 6.22 -- 2.5 -- -- -- 0.0237 1.31 -- -- -- --
399.97 0.931 6.33 -- -- 3.61 -- -- -0.551 -- 22.27 2510 -- --
892.96 1.39 6.19 -- -- -- -- -- 0.0647 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 154.90 radiation 1 14400 > th dose independent rect. 18 11
2 155.64 radiation 1 14400 > th dose independent rect. 18 1
12 156.30 radiation 1 14400 < th dose independent rect. 18 11
15 157.19 radiation 1 14400 < th dose independent rect. 18 7
18 157.42 radiation 1 14400 < th dose independent rect. 18 2
23 158.80 humidity 90 43200 > th dose dependent rect. 21 2
25 159.29 humidity 90 43200 > th dose independent rect. 22 1
27 159.94 humidity 90 43200 < th dose independent rect. 18 1
28 160.71 temperature 25 4320 < th dose independent rect. 6 6
29 160.73 radiation 40 14400 < th dose dependent rect. 18 10
31 160.83 radiation 10 14400 < th dose dependent rect. 18 2
62 161.99 temperature 25 4320 > th dose independent rect. 6 6
89 163.48 temperature 20 14400 > th dose dependent rect. 21 1
131 164.72 temperature 20 4320 > th dose dependent rect. 14 21
144 164.92 temperature 20 4320 > th dose dependent rect. 5 4
147 165.00 temperature 20 4320 > th dose dependent rect. 2 21
148 165.01 temperature 20 4320 > th dose dependent rect. 4 6
157 165.12 temperature 20 4320 > th dose dependent rect. 3 8
176 165.30 temperature 30 14400 < th dose dependent rect. 22 1
179 165.31 radiation 1 14400 > th dose independent rect. 17 17
210 165.45 temperature 20 4320 > th dose dependent rect. 20 23
214 165.49 temperature 20 4320 > th dose dependent no NA NA
252 165.69 temperature 20 4320 > th dose dependent rect. 18 23
281 165.91 temperature 20 4320 > th dose dependent sin 5 NA
325 166.24 temperature 30 4320 < th dose dependent rect. 6 3
340 166.37 radiation 1 14400 < th dose independent rect. 17 14
348 166.37 radiation 1 14400 < th dose dependent rect. 17 17
352 166.42 humidity 90 43200 < th dose independent rect. 17 6
353 166.42 temperature 10 4320 > th dose dependent rect. 6 3
370 166.53 radiation 1 14400 < th dose dependent sin 15 NA
410 166.86 humidity 90 43200 > th dose independent rect. 18 5
412 166.87 radiation 1 14400 < th dose independent rect. 17 17
416 166.89 humidity 90 43200 < th dose independent rect. 21 2
419 166.89 temperature 10 4320 > th dose dependent rect. 5 5
469 167.21 temperature 30 4320 < th dose dependent rect. 5 5
478 167.29 temperature 30 14400 < th dose dependent rect. 21 7
490 167.39 temperature 10 14400 > th dose dependent rect. 21 7
512 167.51 temperature 10 4320 > th dose dependent rect. 2 21
543 167.65 temperature 20 4320 > th dose dependent sin 18 NA
563 167.78 temperature 25 4320 < th dose independent rect. 6 14
576 167.80 temperature 10 4320 > th dose dependent rect. 14 21
617 167.93 temperature 25 14400 > th dose dependent rect. 17 1
678 168.15 radiation 1 14400 > th dose independent sin 13 NA
714 168.30 temperature 10 4320 > th dose dependent no NA NA
739 168.35 temperature 10 4320 > th dose dependent rect. 21 23
742 168.36 temperature 25 14400 < th dose independent rect. 18 1
748 168.38 temperature 25 4320 > th dose independent rect. 6 14
801 168.52 temperature 30 4320 < th dose dependent rect. 7 1
810 168.54 radiation 1 14400 < th dose dependent rect. 9 10
818 168.58 humidity 90 43200 < th dose independent rect. 10 1
841 168.63 temperature 20 4320 > th dose dependent rect. 16 3
854 168.66 radiation 1 14400 < th dose dependent rect. 9 14
959 168.89 temperature 10 14400 > th dose dependent rect. 3 1
961 168.89 temperature 30 14400 < th dose dependent rect. 3 1