Os12g0587400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0587400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 262.54 | 0.761 | 2.79 | -0.0392 | 0.0601 | 0.564 | -0.498 | -2.03 | 0.281 | 7.37 | 7.4 | 83 | -- | -- |
| 262.31 | 0.76 | 2.82 | -0.0481 | 0.0786 | 0.992 | -0.563 | -- | 0.239 | 8.31 | 7.4 | 83 | -- | -- |
| 259.18 | 0.756 | 2.8 | -0.0821 | 0.0752 | 0.462 | -- | -2.46 | 0.259 | 7.13 | 7.4 | 83 | -- | -- |
| 263.22 | 0.761 | 2.82 | -0.0654 | 0.0921 | 1 | -- | -- | 0.238 | 6.65 | 7.4 | 83 | -- | -- |
| 259.47 | 0.754 | 2.8 | -0.084 | -- | 0.431 | -- | -2.5 | 0.26 | -- | 7.324 | 83 | -- | -- |
| 273.89 | 0.776 | 2.82 | -0.172 | 0.0787 | -- | -0.548 | -- | 0.225 | 11.9 | -- | -- | -- | -- |
| 275.18 | 0.777 | 2.82 | -0.193 | 0.0821 | -- | -- | -- | 0.223 | 12.6 | -- | -- | -- | -- |
| 263.65 | 0.76 | 2.82 | -0.0676 | -- | 0.968 | -- | -- | 0.239 | -- | 7.324 | 83 | -- | -- |
| 263.33 | 0.76 | 2.82 | -- | 0.0929 | 1.02 | -- | -- | 0.245 | 6.62 | 7.4 | 83 | -- | -- |
| 275.6 | 0.776 | 2.83 | -0.196 | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
| 276.17 | 0.777 | 2.82 | -- | 0.0851 | -- | -- | -- | 0.244 | 12.7 | -- | -- | -- | -- |
| 263.76 | 0.759 | 2.82 | -- | -- | 0.986 | -- | -- | 0.247 | -- | 7.324 | 83 | -- | -- |
| 276.62 | 0.776 | 2.82 | -- | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.78 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 5 | 255.78 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 256.03 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 10 | 256.31 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 14 | 256.80 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 32 | 257.36 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 35 | 257.67 | wind | 9.0 | 90 | > th | dose dependent | rect. | 20 | 14 |
| 106 | 260.70 | wind | 7.0 | 10 | > th | dose independent | sin | 5 | NA |
| 113 | 260.89 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 7 | 1 |
| 114 | 260.89 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 117 | 260.93 | wind | 7.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 121 | 261.10 | wind | 7.0 | 10 | < th | dose independent | sin | 4 | NA |
| 141 | 261.42 | wind | 7.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 221 | 262.33 | wind | 7.0 | 10 | > th | dose independent | rect. | 18 | 21 |
| 224 | 262.41 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 233 | 262.58 | wind | 7.0 | 90 | > th | dose independent | sin | 4 | NA |
| 240 | 262.63 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 10 |
| 243 | 262.64 | wind | 5.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 256 | 262.71 | wind | 7.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 257 | 262.71 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 19 | 4 |
| 281 | 262.83 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 21 |
| 309 | 262.91 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 315 | 262.93 | wind | 9.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 344 | 263.00 | wind | 7.0 | 10 | > th | dose independent | rect. | 21 | 21 |
| 346 | 263.00 | wind | 7.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 356 | 263.03 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 21 | 2 |
| 370 | 263.06 | wind | 5.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 396 | 263.09 | wind | 7.0 | 10 | > th | dose dependent | rect. | 18 | 21 |
| 424 | 263.15 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 15 |
| 448 | 263.19 | wind | 7.0 | 30 | < th | dose independent | rect. | 15 | 23 |
| 454 | 263.20 | wind | 9.0 | 90 | > th | dose independent | rect. | 11 | 11 |
| 472 | 263.22 | wind | 5.0 | 90 | > th | dose dependent | rect. | 8 | 10 |
| 498 | 263.26 | wind | 7.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 513 | 263.29 | wind | 7.0 | 90 | > th | dose independent | no | NA | NA |
| 522 | 263.30 | wind | 9.0 | 90 | > th | dose independent | rect. | 11 | 8 |
| 530 | 263.32 | wind | 5.0 | 90 | > th | dose dependent | sin | 2 | NA |
| 535 | 263.34 | wind | 7.0 | 10 | > th | dose independent | rect. | 9 | 13 |
| 578 | 263.37 | wind | 7.0 | 90 | < th | dose independent | rect. | 23 | 20 |
| 610 | 263.41 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 12 |
| 614 | 263.41 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 11 |
| 628 | 263.42 | wind | 7.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 634 | 263.43 | wind | 7.0 | 90 | < th | dose independent | no | NA | NA |
| 635 | 263.43 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 14 |
| 659 | 263.44 | wind | 7.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 697 | 263.47 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 698 | 263.48 | wind | 7.0 | 10 | > th | dose independent | no | NA | NA |
| 738 | 263.49 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 8 |
| 742 | 263.50 | wind | 7.0 | 10 | < th | dose independent | no | NA | NA |
| 774 | 263.52 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 21 |
| 894 | 263.62 | wind | 7.0 | 90 | > th | dose dependent | no | NA | NA |
| 925 | 263.66 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 11 |
| 940 | 263.68 | wind | 7.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 945 | 263.69 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 950 | 263.69 | wind | 7.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 969 | 263.73 | wind | 7.0 | 90 | > th | dose independent | rect. | 13 | 23 |
| 993 | 263.77 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 5 |
| 994 | 263.77 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 5 |