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Os12g0586400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0152) R2 : 0.156
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.295 (0.0321) R2dN8 : 0.202 R2N8 : 0.156
σ : 0.287
deviance : 37.73
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.9 0.22 12.1 0.332 0.403 -0.414 -0.0624 -0.375 0.278 19.1 25.3 154 -- --
22.13 0.219 12.1 0.302 0.407 -0.356 -0.032 -- 0.282 19 25.7 146 -- --
21.91 0.218 12.1 0.333 0.399 -0.415 -- -0.365 0.277 19.1 25.4 158 -- --
22.09 0.219 12.1 0.277 0.401 -0.385 -- -- 0.264 19.2 25.6 133 -- --
28.94 0.251 12.1 0.304 -- -0.552 -- -0.475 0.243 -- 27.51 279 -- --
24.22 0.231 12.1 0.37 0.44 -- -0.111 -- 0.344 18.5 -- -- -- --
24.25 0.231 12.1 0.372 0.439 -- -- -- 0.344 18.5 -- -- -- --
29.19 0.252 12.1 0.23 -- -0.535 -- -- 0.221 -- 27.7 266 -- --
23.95 0.228 12.1 -- 0.386 -0.476 -- -- 0.223 19.3 25.4 134 -- --
34.29 0.274 12 0.361 -- -- -- -- 0.335 -- -- -- -- --
27.89 0.247 12.1 -- 0.435 -- -- -- 0.302 18.6 -- -- -- --
30.44 0.257 12.1 -- -- -0.613 -- -- 0.181 -- 27.6 274 -- --
37.73 0.287 12.1 -- -- -- -- -- 0.295 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.09 temperature 10.0 270 > th dose dependent rect. 18 9
10 19.66 temperature 10.0 270 > th dose dependent rect. 20 16
20 19.89 temperature 20.0 10 > th dose independent rect. 20 8
25 19.99 temperature 20.0 10 > th dose independent rect. 9 19
46 20.13 temperature 10.0 90 > th dose dependent rect. 9 18
55 20.22 temperature 20.0 270 > th dose independent rect. 18 8
65 20.30 temperature 10.0 10 > th dose dependent rect. 9 18
81 20.36 humidity 90.0 270 < th dose independent rect. 8 4
83 20.36 radiation 30.0 270 < th dose independent rect. 1 7
92 20.39 wind 1.0 270 > th dose independent rect. 1 6
94 20.39 precipitation 0.1 270 < th dose independent rect. 1 7
95 20.39 atmosphere 1015.0 270 < th dose independent rect. 8 17
99 20.39 precipitation 0.1 270 < th dose dependent rect. 1 7
104 20.43 wind 7.0 270 < th dose independent rect. 1 7
107 20.43 temperature 20.0 10 > th dose independent rect. 20 19
111 20.44 humidity 70.0 270 > th dose independent rect. 1 7
114 20.45 precipitation 0.1 270 < th dose independent rect. 8 17
116 20.45 precipitation 0.1 270 < th dose dependent rect. 8 17
117 20.46 wind 7.0 270 < th dose independent rect. 8 4
118 20.46 wind 9.0 270 < th dose independent rect. 8 17
124 20.47 radiation 40.0 90 < th dose independent rect. 3 6
127 20.47 temperature 10.0 270 > th dose independent rect. 1 7
129 20.47 temperature 30.0 270 < th dose independent rect. 1 7
130 20.47 humidity 50.0 270 > th dose independent rect. 1 7
132 20.47 atmosphere 995.0 270 > th dose independent rect. 1 7
133 20.47 atmosphere 1015.0 270 < th dose independent rect. 1 7
134 20.47 temperature 10.0 270 > th dose independent rect. 8 17
139 20.48 precipitation 0.1 90 < th dose independent rect. 3 6
140 20.48 precipitation 0.1 90 < th dose dependent rect. 3 6
143 20.49 atmosphere 995.0 270 > th dose dependent rect. 1 6
147 20.50 temperature 30.0 90 < th dose independent rect. 3 6
149 20.50 radiation 40.0 270 < th dose dependent rect. 1 7
151 20.51 temperature 15.0 270 > th dose independent rect. 7 6
152 20.51 humidity 60.0 90 > th dose independent rect. 3 6
153 20.51 radiation 1.0 270 > th dose independent rect. 7 6
155 20.51 atmosphere 995.0 90 > th dose independent rect. 9 18
156 20.52 temperature 20.0 90 > th dose independent rect. 21 16
164 20.54 temperature 20.0 10 > th dose independent rect. 20 17
180 20.55 temperature 30.0 270 < th dose dependent rect. 1 6
183 20.56 wind 7.0 90 < th dose independent rect. 3 6
185 20.56 temperature 10.0 90 > th dose independent rect. 3 6
188 20.56 atmosphere 995.0 90 > th dose independent rect. 3 6
189 20.56 atmosphere 1015.0 90 < th dose independent rect. 3 6
190 20.56 temperature 20.0 10 > th dose independent rect. 22 15
191 20.56 temperature 20.0 10 > th dose independent rect. 22 17
194 20.56 temperature 30.0 270 < th dose dependent rect. 23 8
211 20.59 temperature 20.0 10 > th dose independent rect. 18 10
213 20.59 radiation 10.0 270 < th dose independent rect. 17 10
214 20.59 precipitation 0.1 270 < th dose independent rect. 3 14
216 20.59 atmosphere 995.0 90 > th dose dependent rect. 3 6
219 20.59 precipitation 0.1 270 < th dose dependent rect. 3 14
227 20.61 precipitation 0.1 270 < th dose independent rect. 7 6
229 20.61 wind 1.0 270 > th dose independent rect. 12 19
230 20.61 precipitation 0.1 270 < th dose dependent rect. 7 6
233 20.62 precipitation 0.1 270 < th dose independent rect. 13 18
234 20.62 precipitation 0.1 270 < th dose dependent rect. 13 18
237 20.63 atmosphere 995.0 270 > th dose independent rect. 7 6
238 20.63 atmosphere 1015.0 270 < th dose independent rect. 7 6
239 20.63 temperature 10.0 270 > th dose independent rect. 13 18
275 20.67 temperature 20.0 10 > th dose independent rect. 11 17
276 20.67 wind 9.0 270 < th dose independent rect. 13 18
281 20.68 wind 9.0 270 < th dose independent rect. 17 10
293 20.70 precipitation 0.1 270 < th dose independent rect. 17 10
297 20.70 wind 9.0 270 < th dose dependent rect. 8 4
298 20.70 radiation 40.0 270 < th dose dependent rect. 2 5
303 20.70 radiation 40.0 270 < th dose dependent rect. 17 10
304 20.70 precipitation 0.1 270 < th dose dependent rect. 17 10
307 20.71 temperature 10.0 270 > th dose independent rect. 17 10
311 20.71 temperature 10.0 270 > th dose independent rect. 3 14
312 20.71 atmosphere 1015.0 270 < th dose independent rect. 3 14
314 20.71 temperature 30.0 270 < th dose dependent rect. 3 2
339 20.73 wind 9.0 270 < th dose dependent rect. 7 6
347 20.74 precipitation 0.1 270 < th dose independent rect. 3 3
352 20.74 precipitation 0.1 270 < th dose dependent rect. 3 3
364 20.75 temperature 10.0 270 > th dose dependent rect. 8 4
366 20.75 atmosphere 995.0 10 > th dose dependent rect. 3 6
392 20.78 wind 1.0 270 > th dose independent rect. 7 6
393 20.78 humidity 50.0 270 > th dose independent rect. 7 6
396 20.78 humidity 50.0 270 > th dose independent rect. 17 10
417 20.80 wind 9.0 90 < th dose dependent rect. 3 6
425 20.81 atmosphere 1015.0 270 < th dose independent rect. 21 15
426 20.81 wind 1.0 270 > th dose independent rect. 8 17
433 20.82 wind 7.0 270 < th dose independent rect. 3 3
439 20.82 atmosphere 995.0 270 > th dose independent rect. 13 18
440 20.82 radiation 40.0 90 < th dose independent rect. 15 18
457 20.84 humidity 90.0 270 < th dose independent rect. 9 1
460 20.84 temperature 10.0 270 > th dose independent rect. 3 3
462 20.84 temperature 30.0 270 < th dose independent rect. 3 3
463 20.84 humidity 50.0 270 > th dose independent rect. 3 3
466 20.84 atmosphere 995.0 270 > th dose independent rect. 3 3
467 20.84 atmosphere 1015.0 270 < th dose independent rect. 3 3
468 20.84 radiation 20.0 270 < th dose independent rect. 3 3
474 20.84 temperature 10.0 270 > th dose independent rect. 6 21
475 20.84 atmosphere 995.0 270 > th dose dependent rect. 3 3
484 20.85 wind 9.0 270 < th dose independent rect. 3 14
488 20.85 humidity 50.0 270 > th dose independent rect. 8 17
492 20.85 precipitation 0.1 270 < th dose independent rect. 6 21
499 20.85 precipitation 0.1 270 < th dose dependent rect. 6 21
510 20.86 wind 9.0 270 < th dose independent rect. 21 15
515 20.86 radiation 40.0 270 < th dose dependent rect. 3 3
539 20.88 temperature 30.0 270 < th dose dependent rect. 15 16
542 20.89 humidity 50.0 4320 > th dose independent rect. 4 6
543 20.89 precipitation 0.1 10 < th dose independent rect. 3 6
544 20.89 temperature 10.0 270 > th dose independent rect. 12 9
546 20.89 atmosphere 995.0 270 > th dose independent rect. 17 10
547 20.89 temperature 10.0 270 > th dose independent rect. 21 15
548 20.89 atmosphere 995.0 270 > th dose independent rect. 21 15
549 20.89 precipitation 0.1 10 < th dose independent rect. 15 18
550 20.89 wind 9.0 270 < th dose independent rect. 6 21
555 20.89 precipitation 0.1 10 < th dose dependent rect. 3 6
559 20.89 precipitation 0.1 10 < th dose dependent rect. 15 18
604 20.92 wind 1.0 270 > th dose independent rect. 12 9
616 20.93 wind 1.0 270 > th dose independent rect. 3 3
637 20.93 precipitation 0.1 270 < th dose independent rect. 12 9
653 20.93 precipitation 0.1 270 < th dose dependent rect. 12 9
677 20.94 radiation 40.0 90 < th dose independent rect. 13 20
708 20.96 wind 9.0 270 < th dose independent rect. 12 9
712 20.96 atmosphere 1015.0 270 < th dose independent rect. 6 21
740 20.97 wind 7.0 10 < th dose independent rect. 3 6
741 20.97 temperature 10.0 10 > th dose independent rect. 9 6
744 20.97 atmosphere 995.0 10 > th dose independent rect. 9 6
745 20.97 atmosphere 1015.0 10 < th dose independent rect. 9 6
747 20.97 precipitation 0.1 10 < th dose independent rect. 9 6
748 20.97 humidity 90.0 10 < th dose independent rect. 2 7
759 20.97 precipitation 0.1 270 < th dose independent rect. 21 15
760 20.97 temperature 10.0 10 > th dose independent rect. 15 18
769 20.97 precipitation 0.1 10 < th dose dependent rect. 9 6
772 20.97 temperature 15.0 10 > th dose dependent rect. 22 15
774 20.97 precipitation 0.1 270 < th dose dependent rect. 21 15
778 20.98 wind 9.0 10 < th dose independent rect. 9 6
779 20.98 radiation 1.0 10 > th dose independent rect. 9 6
816 21.00 temperature 10.0 1440 > th dose independent rect. 4 6
819 21.00 atmosphere 995.0 1440 > th dose independent rect. 4 6
820 21.00 atmosphere 1015.0 1440 < th dose independent rect. 4 6
825 21.00 wind 9.0 10 < th dose independent rect. 15 18
827 21.00 temperature 10.0 1440 > th dose independent rect. 10 18
830 21.00 precipitation 0.1 10 < th dose independent rect. 9 18
836 21.00 precipitation 0.1 10 < th dose dependent rect. 9 18
848 21.01 humidity 50.0 270 > th dose independent rect. 21 15
862 21.02 temperature 30.0 270 < th dose independent rect. 7 6
868 21.02 atmosphere 1015.0 270 < th dose independent rect. 17 9
876 21.02 temperature 10.0 10 > th dose dependent rect. 11 16
884 21.03 temperature 10.0 1440 > th dose independent rect. 10 6
898 21.03 temperature 10.0 1440 > th dose independent rect. 16 18
903 21.03 atmosphere 995.0 270 > th dose independent rect. 6 21
959 21.06 wind 7.0 270 < th dose independent rect. 9 1
983 21.06 wind 9.0 270 < th dose dependent rect. 3 3