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Os12g0583500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.015) R2 : 0.491
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.783 (0.0385) R2dC : 0.463 R2C : 0.445
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.18 (0.0315) R2dN8 : 0.0467 R2N8 : 0.0287
σ : 0.283
deviance : 36.5
__
_____
C
peak time of C : 16.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.67 0.247 11.6 0.384 0.627 -0.577 0.397 -0.359 0.192 19.9 6.329 119 -- --
28.19 0.247 11.6 0.378 0.634 -0.558 0.169 -- 0.191 19.7 5.632 113 -- --
28 0.246 11.6 0.373 0.632 -0.581 -- -0.214 0.191 19.9 5.7 117 -- --
28.26 0.248 11.6 0.372 0.638 -0.593 -- -- 0.19 20 5.434 117 -- --
31.95 0.263 11.6 0.417 -- -0.684 -- -0.224 0.194 -- 0.1847 541 -- --
31.96 0.265 11.6 0.383 0.787 -- 0.454 -- 0.22 16.2 -- -- -- --
32.53 0.267 11.6 0.388 0.79 -- -- -- 0.223 16.2 -- -- -- --
31.23 0.26 11.6 0.309 -- -0.828 -- -- 0.189 -- 0.1792 556 -- --
31.86 0.263 11.6 -- 0.644 -0.626 -- -- 0.145 20.2 4.763 120 -- --
66.3 0.38 11.5 0.356 -- -- -- -- 0.202 -- -- -- -- --
36.5 0.283 11.6 -- 0.783 -- -- -- 0.18 16.2 -- -- -- --
33.71 0.27 11.6 -- -- -0.853 -- -- 0.156 -- 0.17 560 -- --
69.64 0.39 11.6 -- -- -- -- -- 0.162 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.29 precipitation 0.1 270 < th dose independent rect. 3 22
2 24.29 precipitation 0.1 270 < th dose dependent rect. 3 22
5 24.49 radiation 1.0 90 < th dose dependent sin 1 NA
6 24.53 precipitation 0.1 30 < th dose independent rect. 6 20
7 24.53 precipitation 0.1 30 < th dose dependent rect. 6 20
8 24.59 radiation 1.0 270 < th dose dependent rect. 24 19
17 24.77 atmosphere 1010.0 10 < th dose independent rect. 2 5
21 24.83 radiation 1.0 270 < th dose independent rect. 24 19
22 24.85 radiation 1.0 90 < th dose independent sin 2 NA
25 24.94 atmosphere 1015.0 1440 < th dose independent rect. 3 4
26 24.96 radiation 1.0 90 > th dose independent sin 2 NA
27 25.00 atmosphere 995.0 30 > th dose dependent rect. 2 4
30 25.02 radiation 1.0 90 < th dose independent rect. 2 16
32 25.04 radiation 1.0 90 < th dose independent rect. 2 19
33 25.06 radiation 10.0 90 < th dose dependent rect. 2 7
34 25.07 wind 9.0 10 < th dose independent rect. 2 4
35 25.07 temperature 10.0 10 > th dose independent rect. 2 4
37 25.07 temperature 30.0 10 < th dose independent rect. 2 4
38 25.07 humidity 50.0 10 > th dose independent rect. 2 4
41 25.07 atmosphere 995.0 10 > th dose independent rect. 2 4
44 25.07 radiation 20.0 10 < th dose independent rect. 2 4
48 25.07 temperature 10.0 10 > th dose independent rect. 6 20
64 25.10 wind 9.0 1440 < th dose independent rect. 3 4
65 25.10 temperature 10.0 1440 > th dose independent rect. 3 4
68 25.10 temperature 30.0 1440 < th dose independent rect. 3 4
72 25.10 humidity 50.0 1440 > th dose independent rect. 3 4
77 25.10 atmosphere 995.0 1440 > th dose independent rect. 3 4
79 25.10 radiation 40.0 1440 < th dose independent rect. 3 4
83 25.10 temperature 10.0 1440 > th dose independent rect. 7 20
91 25.12 radiation 40.0 30 < th dose dependent rect. 2 4
98 25.16 wind 9.0 10 < th dose independent rect. 6 20
101 25.17 radiation 10.0 30 < th dose independent rect. 2 6
124 25.35 atmosphere 1000.0 270 > th dose independent rect. 1 2
129 25.36 humidity 80.0 30 > th dose dependent rect. 2 19
138 25.39 atmosphere 995.0 10 > th dose independent rect. 6 20
146 25.40 precipitation 0.1 30 < th dose independent rect. 2 4
148 25.40 humidity 50.0 30 > th dose dependent rect. 2 4
149 25.40 precipitation 0.1 30 < th dose dependent rect. 2 4
168 25.43 temperature 30.0 30 < th dose dependent rect. 2 4
176 25.47 precipitation 0.1 270 < th dose independent rect. 1 2
178 25.47 precipitation 0.1 270 < th dose dependent rect. 1 2
179 25.48 wind 9.0 270 < th dose independent rect. 1 2
180 25.48 temperature 10.0 270 > th dose independent rect. 1 2
182 25.48 temperature 30.0 270 < th dose independent rect. 1 2
183 25.48 humidity 50.0 270 > th dose independent rect. 1 2
187 25.48 atmosphere 1010.0 270 < th dose independent rect. 1 2
189 25.48 radiation 1.0 270 < th dose independent rect. 1 2
195 25.48 temperature 10.0 270 > th dose independent rect. 3 22
196 25.48 radiation 1.0 270 < th dose dependent rect. 1 2
241 25.53 wind 9.0 270 < th dose independent rect. 4 21
266 25.57 wind 9.0 30 < th dose dependent rect. 2 4
267 25.57 radiation 30.0 90 < th dose dependent rect. 15 15
340 25.67 atmosphere 995.0 270 > th dose dependent rect. 1 2
353 25.70 humidity 50.0 30 > th dose dependent rect. 17 13
361 25.73 radiation 1.0 270 < th dose independent rect. 24 8
378 25.76 radiation 1.0 90 < th dose independent rect. 2 13
391 25.78 humidity 90.0 30 > th dose independent rect. 2 18
400 25.79 wind 9.0 270 < th dose dependent rect. 2 1
413 25.81 atmosphere 1015.0 10 < th dose independent rect. 6 20
418 25.82 humidity 50.0 270 > th dose dependent rect. 1 2
425 25.84 wind 1.0 10 > th dose independent rect. 6 20
447 25.86 radiation 40.0 90 < th dose independent rect. 6 20
463 25.88 temperature 10.0 30 > th dose dependent rect. 2 4
473 25.90 wind 1.0 270 > th dose independent rect. 1 3
495 25.90 humidity 50.0 270 > th dose independent rect. 24 19
540 25.93 radiation 20.0 270 < th dose independent rect. 15 14
627 25.99 temperature 15.0 270 > th dose independent rect. 23 22
650 26.02 temperature 10.0 30 > th dose dependent rect. 6 20
692 26.09 temperature 30.0 270 < th dose dependent rect. 1 2
715 26.13 wind 9.0 14400 < th dose independent rect. 23 4
729 26.15 temperature 15.0 30 > th dose independent rect. 17 13
739 26.16 temperature 10.0 270 > th dose dependent rect. 2 1
744 26.16 humidity 70.0 10 > th dose dependent rect. 2 8
748 26.17 precipitation 0.1 270 < th dose independent rect. 20 13
749 26.17 wind 1.0 270 > th dose independent rect. 5 19
753 26.17 precipitation 0.1 270 < th dose dependent rect. 20 13
802 26.19 radiation 1.0 30 > th dose independent rect. 6 11
850 26.21 humidity 70.0 10 > th dose dependent rect. 2 6
876 26.24 humidity 50.0 270 > th dose independent rect. 14 15
907 26.27 precipitation 0.1 270 < th dose independent rect. 21 2
910 26.27 radiation 40.0 270 < th dose independent rect. 20 13
913 26.27 atmosphere 995.0 270 > th dose independent rect. 4 21
914 26.27 precipitation 0.1 270 < th dose dependent rect. 21 2
935 26.28 humidity 70.0 30 > th dose independent rect. 17 13