Os12g0583000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, group 1 domain containing protein.
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Os12g0583000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, group 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.06 | 0.266 | 8.38 | 0.809 | 0.0962 | -0.432 | -0.0314 | 2.41 | 0.157 | 12.1 | 20.8 | 407 | -- | -- |
| 35.78 | 0.279 | 8.44 | 0.435 | 0.0355 | -0.496 | -0.353 | -- | 0.0519 | 7.44 | 13.18 | 742 | -- | -- |
| 32.07 | 0.264 | 8.38 | 0.807 | 0.0964 | -0.431 | -- | 2.41 | 0.156 | 11.9 | 20.87 | 408 | -- | -- |
| 34.8 | 0.275 | 8.45 | 0.4 | 0.132 | -0.256 | -- | -- | -0.0451 | 7.44 | 28.4 | 1163 | -- | -- |
| 32.51 | 0.266 | 8.38 | 0.825 | -- | -0.446 | -- | 2.43 | 0.161 | -- | 20.9 | 487 | -- | -- |
| 36.98 | 0.285 | 8.45 | 0.269 | 0.163 | -- | -0.279 | -- | -0.0285 | 7.79 | -- | -- | -- | -- |
| 37.17 | 0.285 | 8.45 | 0.263 | 0.163 | -- | -- | -- | -0.0276 | 8.34 | -- | -- | -- | -- |
| 35.58 | 0.278 | 8.45 | 0.345 | -- | -0.302 | -- | -- | -0.0218 | -- | 26.7 | 997 | -- | -- |
| 37.37 | 0.285 | 8.46 | -- | 0.15 | -0.199 | -- | -- | -0.0836 | 7.25 | 28.4 | 1135 | -- | -- |
| 38.64 | 0.29 | 8.45 | 0.264 | -- | -- | -- | -- | -0.0259 | -- | -- | -- | -- | -- |
| 38.99 | 0.292 | 8.45 | -- | 0.164 | -- | -- | -- | -0.0569 | 8.22 | -- | -- | -- | -- |
| 38.45 | 0.289 | 8.46 | -- | -- | -0.234 | -- | -- | -0.0714 | -- | 27.7 | 1010 | -- | -- |
| 40.48 | 0.297 | 8.46 | -- | -- | -- | -- | -- | -0.0552 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.35 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 3 | 29.61 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 4 | 29.68 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 10 | 29.77 | humidity | 90 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 11 | 29.79 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 24 | 29.90 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 33 | 29.92 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 47 | 29.99 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 49 | 30.01 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 54 | 30.01 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 57 | 30.05 | humidity | 80 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 58 | 30.05 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 70 | 30.14 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 71 | 30.14 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 72 | 30.15 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 73 | 30.15 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 77 | 30.17 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 78 | 30.19 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 83 | 30.22 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 85 | 30.23 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 96 | 30.27 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 103 | 30.29 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 106 | 30.30 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 124 | 30.37 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 141 | 30.41 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 147 | 30.43 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 162 | 30.50 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 163 | 30.51 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 171 | 30.53 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 179 | 30.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 199 | 30.57 | radiation | 20 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 207 | 30.61 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 246 | 30.65 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 247 | 30.65 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 248 | 30.65 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 254 | 30.67 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 261 | 30.68 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 263 | 30.69 | radiation | 40 | 43200 | > th | dose independent | sin | 5 | NA |
| 267 | 30.69 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 319 | 30.71 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 321 | 30.72 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 325 | 30.72 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 344 | 30.74 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 384 | 30.78 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 385 | 30.78 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 546 | 30.80 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 552 | 30.81 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 561 | 30.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 562 | 30.82 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 579 | 30.83 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 596 | 30.85 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 619 | 30.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 621 | 30.86 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 631 | 30.86 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 640 | 30.87 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 646 | 30.88 | wind | 3 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 656 | 30.89 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 667 | 30.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 702 | 30.92 | wind | 7 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 736 | 30.94 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 757 | 30.96 | humidity | 80 | 43200 | < th | dose independent | sin | 11 | NA |
| 781 | 30.96 | wind | 9 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 798 | 30.98 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 802 | 30.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 813 | 30.98 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 814 | 30.99 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 845 | 30.99 | wind | 7 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 850 | 31.00 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 891 | 31.01 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 924 | 31.03 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 969 | 31.05 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |