Os12g0582800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF221 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0582800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF221 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.54 | 0.334 | 9.22 | -0.101 | 0.511 | 0.736 | 0.151 | 1.26 | 0.358 | 14.1 | 20.49 | 975 | -- | -- |
| 54.19 | 0.343 | 9.25 | -0.3 | 0.497 | 0.552 | -0.151 | -- | 0.307 | 13.9 | 21 | 887 | -- | -- |
| 50.62 | 0.331 | 9.22 | -0.106 | 0.511 | 0.734 | -- | 1.21 | 0.359 | 14 | 20.49 | 978 | -- | -- |
| 54.26 | 0.343 | 9.25 | -0.3 | 0.497 | 0.552 | -- | -- | 0.307 | 13.9 | 21 | 887 | -- | -- |
| 64.34 | 0.374 | 9.22 | -0.0841 | -- | 0.685 | -- | 1.25 | 0.347 | -- | 20.94 | 1687 | -- | -- |
| 63.52 | 0.374 | 9.23 | -0.0957 | 0.449 | -- | 0.0236 | -- | 0.44 | 14.6 | -- | -- | -- | -- |
| 63.52 | 0.373 | 9.23 | -0.0951 | 0.449 | -- | -- | -- | 0.44 | 14.6 | -- | -- | -- | -- |
| 62.8 | 0.369 | 9.25 | -0.246 | -- | 0.466 | -- | -- | 0.336 | -- | 21.9 | 126 | -- | -- |
| 55.93 | 0.348 | 9.25 | -- | 0.433 | 0.397 | -- | -- | 0.34 | 14 | 22 | 508 | -- | -- |
| 75.36 | 0.406 | 9.23 | -0.114 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 63.76 | 0.374 | 9.22 | -- | 0.451 | -- | -- | -- | 0.451 | 14.6 | -- | -- | -- | -- |
| 55.97 | 0.348 | 9.27 | -- | -- | 0.49 | -- | -- | 0.199 | -- | 24.9 | 97 | -- | -- |
| 75.7 | 0.406 | 9.23 | -- | -- | -- | -- | -- | 0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.59 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 2 | 43.92 | temperature | 10 | 90 | > th | dose dependent | sin | 4 | NA |
| 41 | 45.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 13 |
| 43 | 45.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 47 | 45.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 60 | 45.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 62 | 46.03 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 81 | 46.38 | temperature | 25 | 90 | < th | dose independent | sin | 4 | NA |
| 169 | 47.62 | temperature | 25 | 90 | > th | dose independent | sin | 3 | NA |
| 179 | 47.72 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 16 |
| 186 | 47.77 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 16 |
| 204 | 47.92 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 14 |
| 216 | 48.04 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 14 |
| 236 | 48.22 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 12 |
| 243 | 48.31 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 12 |
| 262 | 48.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 263 | 48.41 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 15 |
| 304 | 48.70 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 10 |
| 348 | 48.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 361 | 49.03 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 15 |
| 426 | 49.34 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 10 |
| 432 | 49.39 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 439 | 49.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 498 | 49.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 536 | 49.87 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 9 |
| 587 | 50.08 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 22 |
| 813 | 50.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 826 | 50.83 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 7 |
| 862 | 50.88 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 877 | 50.90 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 21 |
| 915 | 51.01 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 8 |