Os12g0582700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os12g0582700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 383.14 | 0.92 | 3.68 | -0.304 | 0.593 | -5.66 | -0.36 | -9.51 | 0.114 | 1.12 | 8.9 | 69 | -- | -- |
| 387.96 | 0.917 | 3.66 | -0.339 | 0.683 | -4.2 | -0.403 | -- | 0.0681 | 0.903 | 8.8 | 100 | -- | -- |
| 383.66 | 0.912 | 3.69 | -0.291 | 0.59 | -5.66 | -- | -9.76 | 0.108 | 1.12 | 8.874 | 68 | -- | -- |
| 388.06 | 0.917 | 3.64 | -0.385 | 0.595 | -3.9 | -- | -- | 0.121 | 1.11 | 8.797 | 102 | -- | -- |
| 404.95 | 0.937 | 3.68 | -0.298 | -- | -5.39 | -- | -9.92 | 0.115 | -- | 8.891 | 70 | -- | -- |
| 426.26 | 0.968 | 3.66 | -0.613 | 0.484 | -- | -0.249 | -- | 0.034 | 0.432 | -- | -- | -- | -- |
| 426.52 | 0.967 | 3.66 | -0.603 | 0.485 | -- | -- | -- | 0.0349 | 0.528 | -- | -- | -- | -- |
| 409.41 | 0.942 | 3.64 | -0.383 | -- | -3.54 | -- | -- | 0.125 | -- | 8.8 | 101 | -- | -- |
| 391.72 | 0.922 | 3.63 | -- | 0.593 | -4.13 | -- | -- | 0.169 | 1.14 | 8.785 | 101 | -- | -- |
| 441.26 | 0.982 | 3.65 | -0.587 | -- | -- | -- | -- | 0.0431 | -- | -- | -- | -- | -- |
| 436.12 | 0.977 | 3.65 | -- | 0.476 | -- | -- | -- | 0.102 | 0.465 | -- | -- | -- | -- |
| 413.09 | 0.947 | 3.62 | -- | -- | -3.73 | -- | -- | 0.171 | -- | 8.779 | 101 | -- | -- |
| 450.33 | 0.991 | 3.64 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 369.65 | wind | 9 | 30 | > th | dose dependent | sin | 10 | NA |
| 2 | 371.35 | wind | 9 | 90 | > th | dose independent | sin | 10 | NA |
| 3 | 371.72 | wind | 9 | 90 | < th | dose independent | sin | 10 | NA |
| 12 | 377.82 | wind | 9 | 30 | > th | dose independent | sin | 15 | NA |
| 18 | 378.96 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 18 |
| 26 | 380.77 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 9 |
| 52 | 382.16 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 63 | 382.69 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 5 |
| 81 | 382.98 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 85 | 383.41 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 19 |
| 122 | 385.48 | wind | 9 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 194 | 387.32 | wind | 9 | 90 | > th | dose dependent | rect. | 11 | 15 |
| 202 | 387.35 | wind | 9 | 90 | > th | dose independent | rect. | 11 | 15 |
| 219 | 387.64 | wind | 9 | 90 | > th | dose dependent | rect. | 11 | 12 |
| 222 | 387.67 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 10 |
| 227 | 387.80 | wind | 9 | 90 | > th | dose independent | rect. | 11 | 12 |
| 233 | 387.92 | wind | 9 | 90 | < th | dose independent | no | NA | NA |
| 243 | 388.13 | wind | 9 | 30 | > th | dose dependent | no | NA | NA |
| 259 | 388.13 | wind | 9 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 287 | 388.13 | wind | 9 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 326 | 388.32 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 5 |
| 374 | 388.71 | wind | 9 | 720 | > th | dose independent | sin | 5 | NA |
| 377 | 388.73 | wind | 9 | 720 | > th | dose independent | rect. | 20 | 17 |
| 382 | 388.80 | wind | 9 | 720 | > th | dose independent | rect. | 20 | 20 |
| 385 | 388.82 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 468 | 388.96 | wind | 9 | 720 | > th | dose dependent | rect. | 10 | 6 |
| 483 | 389.13 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 484 | 389.13 | wind | 9 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 534 | 389.41 | wind | 9 | 720 | > th | dose dependent | sin | 4 | NA |
| 536 | 389.46 | wind | 9 | 720 | < th | dose independent | sin | 5 | NA |
| 537 | 389.48 | wind | 9 | 720 | > th | dose independent | rect. | 10 | 6 |
| 572 | 389.60 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 15 |
| 586 | 389.64 | wind | 9 | 90 | > th | dose independent | rect. | 19 | 23 |
| 612 | 389.69 | wind | 9 | 90 | > th | dose independent | no | NA | NA |
| 628 | 389.69 | wind | 9 | 90 | > th | dose independent | rect. | 1 | 22 |
| 887 | 390.59 | wind | 9 | 720 | > th | dose dependent | rect. | 10 | 3 |
| 919 | 390.94 | wind | 9 | 720 | > th | dose independent | rect. | 10 | 3 |
| 967 | 391.02 | wind | 9 | 720 | < th | dose independent | rect. | 19 | 23 |
| 974 | 391.14 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 12 |
| 978 | 391.17 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 1 |
| 988 | 391.31 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 1 |