Os12g0576600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Purple acid phosphatase, N-terminal domain containing protein.
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Os12g0576600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Purple acid phosphatase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.46 | 0.557 | 8.36 | -3.18 | 3.67 | 2.84 | 1.49 | -0.173 | 0.0254 | 19.8 | 0.27 | 205 | 21 | -- |
| 139.51 | 0.55 | 8.35 | -3.16 | 3.6 | 2.87 | 1.72 | -- | 0.0282 | 19.9 | 0.2303 | 202 | 20.7 | -- |
| 144.65 | 0.56 | 8.38 | -3.19 | 3.6 | 2.79 | -- | -0.666 | 0.0267 | 19.8 | 0.28 | 204 | 20.7 | -- |
| 146.24 | 0.563 | 8.35 | -3.23 | 3.55 | 2.84 | -- | -- | 0.0149 | 19.9 | 0.2293 | 192 | 20.4 | -- |
| 195.81 | 0.652 | 8.26 | -3.14 | -- | 3.62 | -- | 0.914 | 0.0469 | -- | -68.39 | 835 | 20.4 | -- |
| 195.81 | 0.656 | 8.31 | -3.13 | 3.63 | -- | 0.911 | -- | 0.0465 | 16.6 | -- | -- | -- | -- |
| 198 | 0.659 | 8.3 | -3.12 | 3.64 | -- | -- | -- | 0.0513 | 16.6 | -- | -- | -- | -- |
| 198 | 0.655 | 8.25 | -3.12 | -- | 3.63 | -- | -- | 0.0515 | -- | -45.58 | 841 | 20.4 | -- |
| 416.58 | 0.951 | 8.28 | -- | 3.83 | 2.73 | -- | -- | 0.363 | 19.5 | 1.411 | 140 | 20.9 | -- |
| 903.96 | 1.4 | 8.28 | -3.26 | -- | -- | -- | -- | -0.0443 | -- | -- | -- | -- | -- |
| 455.06 | 0.998 | 8.23 | -- | 3.7 | -- | -- | -- | 0.399 | 16.5 | -- | -- | -- | -- |
| 455.06 | 0.994 | 8.18 | -- | -- | 3.68 | -- | -- | 0.4 | -- | -45.54 | 890 | 20.9 | -- |
| 1184.9 | 1.61 | 8.19 | -- | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.53 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 3 | 141.88 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 4 | 141.88 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 5 | 142.04 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 6 | 142.13 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 8 | 142.72 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 9 | 142.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 10 | 142.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 12 | 143.07 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 15 | 143.36 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 17 | 143.36 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 18 | 143.36 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 21 | 143.36 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 22 | 143.36 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 30 | 143.48 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 31 | 143.59 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 35 | 143.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 36 | 143.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 45 | 144.15 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 47 | 144.18 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 48 | 144.25 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 55 | 144.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 57 | 144.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 58 | 144.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 61 | 144.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 62 | 144.32 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 72 | 144.60 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 4 |
| 73 | 144.60 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 4 |
| 78 | 144.86 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 85 | 145.12 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 93 | 145.32 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 99 | 145.58 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 102 | 145.65 | temperature | 15.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 118 | 145.90 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 146 | 145.99 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 149 | 146.04 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 167 | 146.40 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 219 | 146.99 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 225 | 147.13 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 20 |
| 227 | 147.13 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 230 | 147.14 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 232 | 147.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 233 | 147.14 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 236 | 147.14 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 237 | 147.14 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 251 | 147.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 307 | 148.22 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 327 | 148.28 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 328 | 148.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 331 | 148.28 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 335 | 148.28 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 340 | 148.28 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 341 | 148.28 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 342 | 148.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 348 | 148.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 376 | 148.66 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 377 | 148.66 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 400 | 148.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 7 |
| 409 | 149.06 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 414 | 149.15 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 454 | 149.46 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 458 | 149.53 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 475 | 149.70 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 587 | 150.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 604 | 150.64 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 606 | 150.65 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 613 | 150.73 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 616 | 150.76 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 714 | 151.50 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 721 | 151.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 10 |
| 723 | 151.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 726 | 151.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 22 |
| 761 | 151.98 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 782 | 152.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 14 |
| 784 | 152.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 815 | 152.59 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 829 | 152.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 914 | 153.34 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 9 |
| 918 | 153.35 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 17 |
| 933 | 153.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 942 | 153.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 943 | 153.59 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 967 | 153.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 968 | 153.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 970 | 153.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 976 | 153.66 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 992 | 153.71 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 7 |