Os12g0576100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0576100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.33 | 0.431 | 14.7 | 0.914 | 1.22 | 0.66 | 1.78 | 3.68 | 0.759 | 22.8 | 0.7025 | 1422 | -- | -- |
| 88.69 | 0.442 | 14.7 | 1.34 | 0.916 | 0.367 | 1.52 | -- | 0.811 | 22.3 | 19.49 | 1600 | -- | -- |
| 87.64 | 0.436 | 14.7 | 0.84 | 1.21 | 0.29 | -- | 4.1 | 0.759 | 22.4 | 0.78 | 1629 | -- | -- |
| 97.75 | 0.463 | 14.7 | 1.28 | 0.882 | 0.416 | -- | -- | 0.808 | 22 | 19.49 | 1600 | -- | -- |
| 117.66 | 0.508 | 14.6 | 1.29 | -- | 0.74 | -- | 1.13 | 0.831 | -- | 1.1 | 1618 | -- | -- |
| 94.45 | 0.456 | 14.7 | 1.33 | 1.17 | -- | 1.59 | -- | 0.817 | 22.7 | -- | -- | -- | -- |
| 104.89 | 0.48 | 14.7 | 1.27 | 1.17 | -- | -- | -- | 0.813 | 22.6 | -- | -- | -- | -- |
| 114.98 | 0.502 | 14.6 | 1.22 | -- | 0.824 | -- | -- | 0.798 | -- | 8.011 | 45 | -- | -- |
| 131.79 | 0.535 | 14.7 | -- | 1.04 | 0.536 | -- | -- | 0.751 | 22.8 | 38.99 | 23997 | -- | -- |
| 188.47 | 0.641 | 14.6 | 1.29 | -- | -- | -- | -- | 0.819 | -- | -- | -- | -- | -- |
| 147.11 | 0.567 | 14.7 | -- | 1.17 | -- | -- | -- | 0.672 | 22.7 | -- | -- | -- | -- |
| 153.14 | 0.578 | 14.7 | -- | -- | 0.858 | -- | -- | 0.671 | -- | 8.395 | 27 | -- | -- |
| 232.18 | 0.711 | 14.7 | -- | -- | -- | -- | -- | 0.676 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.09 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 2 | 77.10 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 11 | 77.48 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 14 | 77.54 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 15 | 77.56 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 20 | 77.62 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 44 | 78.02 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 58 | 78.13 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 70 | 78.23 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 77 | 78.27 | temperature | 20.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 95 | 78.39 | temperature | 20.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 146 | 78.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 149 | 78.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 179 | 78.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 224 | 78.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 251 | 79.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 309 | 79.23 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 341 | 79.35 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 345 | 79.35 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 388 | 79.48 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 392 | 79.49 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 405 | 79.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 410 | 79.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 454 | 79.60 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 479 | 79.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 487 | 79.66 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 4 | 22 |
| 514 | 79.70 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 515 | 79.70 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 519 | 79.71 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 538 | 79.73 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 547 | 79.77 | temperature | 20.0 | 14400 | > th | dose independent | no | NA | NA |
| 567 | 79.79 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 13 | 9 |
| 593 | 79.86 | temperature | 20.0 | 14400 | < th | dose independent | no | NA | NA |
| 597 | 79.86 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 598 | 79.86 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 601 | 79.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 11 |
| 602 | 79.86 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 15 |
| 603 | 79.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 607 | 79.87 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 618 | 79.89 | radiation | 10.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 640 | 79.91 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 649 | 79.92 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 673 | 79.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 702 | 79.96 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 737 | 79.99 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 739 | 79.99 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 746 | 79.99 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 812 | 80.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 830 | 80.05 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 879 | 80.07 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 15 |