Os12g0575300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0575300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.26 | 0.451 | 15 | 0.555 | 1.06 | -0.824 | 1.93 | 1.29 | 0.684 | 22.5 | 24.86 | 661 | -- | -- |
| 93.31 | 0.45 | 15 | 0.751 | 1.07 | -1.06 | 1.7 | -- | 0.754 | 22.5 | 22.99 | 680 | -- | -- |
| 100.81 | 0.471 | 15 | 0.365 | 1.27 | -0.514 | -- | 2.73 | 0.679 | 22.6 | 28.02 | 21 | -- | -- |
| 104.9 | 0.477 | 15 | 0.696 | 1.07 | -1.03 | -- | -- | 0.755 | 22.3 | 23.06 | 668 | -- | -- |
| 164.57 | 0.597 | 15 | 0.311 | -- | -1.54 | -- | 1.48 | 0.599 | -- | 63.08 | 739 | -- | -- |
| 107.41 | 0.486 | 14.9 | 1.02 | 1.18 | -- | 1.63 | -- | 0.92 | 22.4 | -- | -- | -- | -- |
| 118.12 | 0.509 | 14.9 | 0.961 | 1.17 | -- | -- | -- | 0.917 | 22.3 | -- | -- | -- | -- |
| 165.54 | 0.599 | 15 | 0.592 | -- | -1.51 | -- | -- | 0.689 | -- | 89.4 | 750 | -- | -- |
| 103.6 | 0.474 | 15 | -- | 1.14 | -1.08 | -- | -- | 0.679 | 22.2 | 16.76 | 28934 | -- | -- |
| 201.53 | 0.663 | 14.9 | 0.978 | -- | -- | -- | -- | 0.92 | -- | -- | -- | -- | -- |
| 142.45 | 0.558 | 15 | -- | 1.18 | -- | -- | -- | 0.81 | 22.3 | -- | -- | -- | -- |
| 173.81 | 0.614 | 15 | -- | -- | -1.74 | -- | -- | 0.594 | -- | 143.1 | 767 | -- | -- |
| 226.77 | 0.703 | 14.9 | -- | -- | -- | -- | -- | 0.812 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.99 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 2 | 83.04 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 3 | 84.18 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 4 | 84.69 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 8 | 84.88 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 84.94 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 15 | 85.11 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 16 | 85.17 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 17 | 85.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 50 | 85.84 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 54 | 85.89 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 58 | 85.93 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 95 | 86.40 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 106 | 86.47 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 109 | 86.49 | temperature | 20.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 123 | 86.63 | temperature | 20.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 132 | 86.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 135 | 86.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 137 | 86.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 140 | 86.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 174 | 86.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 183 | 86.98 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 233 | 87.29 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 235 | 87.30 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 249 | 87.38 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 290 | 87.53 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 307 | 87.57 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 322 | 87.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 323 | 87.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 347 | 87.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 349 | 87.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 358 | 87.75 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 366 | 87.78 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 377 | 87.83 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 389 | 87.86 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 391 | 87.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 407 | 87.90 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 428 | 87.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 471 | 88.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 473 | 88.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 482 | 88.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 495 | 88.10 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 526 | 88.14 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 530 | 88.15 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 553 | 88.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 556 | 88.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 557 | 88.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 558 | 88.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 608 | 88.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 666 | 88.35 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 678 | 88.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 687 | 88.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 763 | 88.44 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 782 | 88.46 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 785 | 88.46 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 823 | 88.49 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 834 | 88.50 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 850 | 88.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 867 | 88.53 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 869 | 88.53 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 899 | 88.55 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 946 | 88.58 | temperature | 20.0 | 14400 | > th | dose independent | no | NA | NA |
| 980 | 88.60 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 992 | 88.60 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 7 | 14 |