Os12g0574000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
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Os12g0574000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.22 | 0.391 | -2170 | 13300 | 0.178 | -414000 | -0.206 | 2530000 | 0.0121 | 5.14 | 1 | 4 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 76.64 | 0.41 | 3.2 | 0.0743 | 0.138 | -- | -0.38 | -- | -0.000383 | 5.49 | -- | -- | -- | -- |
| 77 | 0.411 | 3.2 | 0.073 | 0.136 | -- | -- | -- | 0.00128 | 5.49 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 77.96 | 0.413 | 3.2 | 0.0775 | -- | -- | -- | -- | 0.0046 | -- | -- | -- | -- | -- |
| 77.14 | 0.411 | 3.2 | -- | 0.137 | -- | -- | -- | -0.00685 | 5.46 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 78.12 | 0.413 | 3.2 | -- | -- | -- | -- | -- | -0.004 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.39 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 18 | 2 |
| 2 | 63.40 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 18 | 2 |
| 5 | 63.50 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 8 | 63.51 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 1 |
| 31 | 65.72 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 1 |
| 57 | 67.40 | atmosphere | 995 | 270 | > th | dose independent | sin | 10 | NA |
| 80 | 67.67 | atmosphere | 995 | 270 | < th | dose independent | sin | 9 | NA |
| 90 | 68.01 | atmosphere | 995 | 270 | < th | dose dependent | sin | 9 | NA |
| 271 | 68.92 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 272 | 68.92 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 273 | 68.93 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 289 | 68.96 | radiation | 10 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 340 | 69.22 | atmosphere | 995 | 270 | < th | dose dependent | no | NA | NA |
| 533 | 69.24 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 1 |
| 590 | 69.26 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 5 |
| 605 | 69.55 | atmosphere | 995 | 270 | < th | dose independent | no | NA | NA |
| 823 | 69.72 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 2 |
| 839 | 69.74 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 3 | 23 |
| 841 | 69.75 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 868 | 70.03 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 886 | 70.15 | atmosphere | 995 | 270 | > th | dose independent | no | NA | NA |