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Os12g0573900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.23 (0.0199) R2 : 0.615
β1 : -1.18 (0.0728) R2dD : 0.229 R2D : 0.222
β2 : 1.08 (0.0503) R2dC : 0.393 R2C : 0.389
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0316 (0.0424) R2dN8 : 0.000629 R2N8 : -0.00651
σ : 0.374
deviance : 63.72
__
_____
C
peak time of C : 8.23
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.22 0.352 9.24 -1.2 0.95 0.431 -0.506 0.19 -0.0308 6.9 17.76 11 -- --
56.4 0.35 9.24 -1.2 0.951 0.435 -0.431 -- -0.0315 6.86 17.77 11 -- --
56.84 0.351 9.24 -1.21 0.946 0.45 -- 0.129 -0.0296 6.8 17.76 11 -- --
56.88 0.351 9.24 -1.2 0.947 0.441 -- -- -0.0301 6.85 17.78 11 -- --
101.49 0.472 9.26 -1.2 -- 0.525 -- -0.115 -0.0265 -- 14.42 10 -- --
63.45 0.373 9.23 -1.17 1.08 -- -0.297 -- -0.0319 8.22 -- -- -- --
63.72 0.374 9.23 -1.18 1.08 -- -- -- -0.0316 8.23 -- -- -- --
101.58 0.471 9.26 -1.2 -- 0.524 -- -- -0.0261 -- 14.5 9 -- --
94.68 0.453 9.21 -- 0.999 0.391 -- -- 0.0816 7.02 19.7 9 -- --
128.32 0.529 9.26 -1.17 -- -- -- -- -0.0194 -- -- -- -- --
100.18 0.468 9.2 -- 1.08 -- -- -- 0.0994 8.31 -- -- -- --
136.47 0.544 9.23 -- -- 0.496 -- -- 0.16 -- 8.42 9 -- --
164.32 0.598 9.23 -- -- -- -- -- 0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.98 temperature 10.0 270 > th dose dependent rect. 18 17
6 45.53 temperature 10.0 270 > th dose dependent rect. 6 6
17 46.56 atmosphere 995.0 270 > th dose independent rect. 11 7
19 46.61 wind 9.0 270 < th dose independent rect. 18 17
20 46.71 wind 7.0 270 < th dose independent rect. 22 9
21 46.74 temperature 10.0 270 > th dose independent rect. 11 7
22 46.74 atmosphere 1015.0 270 < th dose independent rect. 11 7
23 46.74 temperature 15.0 270 > th dose independent rect. 7 15
24 46.74 temperature 10.0 270 > th dose independent rect. 18 17
25 46.75 radiation 40.0 270 < th dose dependent rect. 22 9
27 46.76 wind 9.0 270 < th dose independent rect. 7 15
28 46.78 radiation 20.0 270 < th dose independent rect. 22 9
30 46.79 humidity 70.0 270 > th dose independent rect. 22 9
31 46.80 temperature 10.0 270 > th dose independent rect. 22 9
32 46.80 temperature 30.0 270 < th dose independent rect. 22 9
33 46.80 humidity 50.0 270 > th dose independent rect. 22 9
35 46.80 atmosphere 995.0 270 > th dose independent rect. 22 9
39 46.82 radiation 1.0 270 > th dose independent rect. 11 7
40 46.82 precipitation 0.1 270 < th dose independent rect. 22 9
41 46.82 precipitation 0.1 270 < th dose dependent rect. 22 9
42 46.84 temperature 15.0 270 > th dose independent rect. 6 6
45 46.87 radiation 1.0 270 > th dose independent rect. 11 19
46 46.88 precipitation 0.1 270 < th dose independent rect. 11 7
47 46.88 humidity 50.0 270 > th dose independent rect. 18 17
48 46.88 precipitation 0.1 270 < th dose dependent rect. 11 7
66 47.10 wind 9.0 270 < th dose independent rect. 11 7
67 47.14 radiation 1.0 270 > th dose independent rect. 6 6
69 47.16 radiation 1.0 270 > th dose independent rect. 12 5
71 47.17 radiation 1.0 270 > th dose independent rect. 18 18
84 47.20 atmosphere 995.0 270 > th dose independent rect. 18 17
85 47.22 temperature 10.0 10 > th dose dependent rect. 20 17
86 47.25 humidity 90.0 270 < th dose independent rect. 12 5
93 47.31 temperature 30.0 270 < th dose dependent rect. 23 7
95 47.33 precipitation 0.1 270 < th dose independent rect. 18 17
96 47.33 precipitation 0.1 270 < th dose dependent rect. 18 17
97 47.34 wind 1.0 270 > th dose independent rect. 11 7
119 47.53 atmosphere 995.0 270 > th dose independent rect. 12 18
121 47.56 radiation 1.0 270 > th dose independent rect. 7 4
124 47.57 precipitation 0.1 270 < th dose independent rect. 7 15
125 47.57 precipitation 0.1 270 < th dose dependent rect. 7 15
126 47.60 temperature 15.0 270 > th dose independent rect. 7 4
128 47.60 wind 9.0 270 < th dose independent rect. 17 19
133 47.65 atmosphere 995.0 270 > th dose independent rect. 12 5
137 47.68 wind 7.0 270 < th dose independent rect. 6 6
140 47.70 atmosphere 1015.0 270 < th dose independent rect. 22 9
160 47.78 radiation 40.0 90 < th dose independent rect. 13 6
166 47.83 precipitation 0.1 270 < th dose independent rect. 12 5
167 47.83 precipitation 0.1 270 < th dose independent rect. 12 18
168 47.83 precipitation 0.1 270 < th dose dependent rect. 12 5
169 47.83 precipitation 0.1 270 < th dose dependent rect. 12 18
171 47.85 temperature 10.0 270 > th dose independent rect. 12 5
173 47.85 atmosphere 1015.0 270 < th dose independent rect. 12 5
174 47.85 temperature 10.0 270 > th dose independent rect. 17 19
182 47.92 precipitation 0.1 270 < th dose independent rect. 6 6
183 47.92 precipitation 0.1 270 < th dose dependent rect. 6 6
189 47.96 humidity 90.0 270 < th dose independent rect. 7 4
192 47.99 wind 9.0 270 < th dose independent rect. 12 5
196 48.01 humidity 90.0 90 < th dose independent rect. 7 7
198 48.03 atmosphere 995.0 270 > th dose independent rect. 6 6
199 48.03 atmosphere 1015.0 270 < th dose independent rect. 6 6
200 48.03 temperature 10.0 270 > th dose independent rect. 12 18
226 48.17 humidity 50.0 270 > th dose independent rect. 7 15
242 48.22 wind 9.0 270 < th dose independent rect. 12 18
244 48.23 atmosphere 995.0 270 > th dose independent rect. 11 20
245 48.23 wind 9.0 270 < th dose dependent rect. 7 4
246 48.24 wind 1.0 270 > th dose independent rect. 12 18
250 48.25 precipitation 0.1 270 < th dose independent rect. 17 19
252 48.25 precipitation 0.1 270 < th dose dependent rect. 17 19
260 48.28 wind 1.0 270 > th dose independent rect. 1 16
268 48.30 humidity 50.0 270 > th dose independent rect. 6 6
275 48.32 radiation 30.0 270 < th dose dependent rect. 16 9
279 48.34 wind 7.0 270 < th dose independent rect. 7 4
280 48.34 wind 1.0 270 > th dose independent rect. 12 5
288 48.35 wind 9.0 270 < th dose dependent rect. 6 6
305 48.38 wind 1.0 270 > th dose independent rect. 23 8
310 48.40 precipitation 0.1 270 < th dose independent rect. 11 20
312 48.40 precipitation 0.1 270 < th dose dependent rect. 11 20
320 48.44 atmosphere 995.0 270 > th dose independent rect. 1 16
322 48.45 wind 9.0 270 < th dose independent rect. 17 8
323 48.45 radiation 10.0 270 < th dose independent rect. 16 9
325 48.45 radiation 20.0 43200 < th dose dependent rect. 20 7
334 48.47 atmosphere 1015.0 270 < th dose independent rect. 7 15
336 48.49 precipitation 0.1 270 < th dose independent rect. 7 4
337 48.49 precipitation 0.1 270 < th dose dependent rect. 7 4
339 48.50 temperature 10.0 270 > th dose independent rect. 17 8
343 48.50 temperature 10.0 270 > th dose independent rect. 1 16
344 48.50 atmosphere 1015.0 270 < th dose independent rect. 1 16
346 48.50 radiation 10.0 270 < th dose dependent sin 17 NA
354 48.53 humidity 50.0 270 > th dose independent rect. 17 8
366 48.56 temperature 10.0 10 > th dose dependent rect. 7 8
385 48.59 radiation 40.0 90 < th dose independent rect. 13 18
390 48.60 atmosphere 995.0 270 > th dose independent rect. 7 4
391 48.60 atmosphere 1015.0 270 < th dose independent rect. 7 4
395 48.60 temperature 10.0 270 > th dose independent rect. 11 20
419 48.66 humidity 50.0 270 > th dose independent rect. 7 4
446 48.69 precipitation 0.1 270 < th dose independent rect. 1 16
448 48.69 precipitation 0.1 270 < th dose dependent rect. 1 16
479 48.79 humidity 90.0 10 < th dose independent rect. 7 8
489 48.81 atmosphere 995.0 270 > th dose dependent rect. 23 8
512 48.89 wind 9.0 270 < th dose independent rect. 11 20
517 48.93 wind 9.0 270 < th dose independent rect. 1 16
581 49.16 precipitation 0.1 270 < th dose independent rect. 17 8
582 49.16 precipitation 0.1 270 < th dose dependent rect. 17 8
639 49.29 atmosphere 1000.0 10 > th dose independent rect. 15 17
654 49.37 wind 1.0 270 > th dose independent rect. 7 15
665 49.41 wind 1.0 270 > th dose independent rect. 17 8
666 49.41 atmosphere 1015.0 270 < th dose independent rect. 12 18
704 49.48 humidity 50.0 270 > th dose dependent rect. 22 9
725 49.54 radiation 40.0 270 < th dose independent rect. 18 17
730 49.56 temperature 10.0 1440 > th dose independent rect. 14 6
735 49.56 temperature 10.0 1440 > th dose independent rect. 20 18
738 49.56 atmosphere 995.0 1440 > th dose independent rect. 20 18
756 49.62 temperature 10.0 270 > th dose dependent rect. 12 5
758 49.63 radiation 1.0 270 > th dose independent sin 18 NA
764 49.65 radiation 1.0 270 < th dose independent sin 18 NA
783 49.69 temperature 15.0 270 > th dose independent rect. 9 1
805 49.71 temperature 20.0 10 > th dose independent rect. 8 7
864 49.77 radiation 1.0 270 < th dose independent sin 6 NA
868 49.78 temperature 10.0 270 > th dose dependent rect. 13 3
880 49.81 radiation 40.0 10 < th dose independent rect. 13 6
924 49.86 radiation 1.0 270 > th dose independent sin 6 NA
934 49.89 atmosphere 995.0 270 > th dose independent rect. 17 8
944 49.91 wind 1.0 270 > th dose independent rect. 7 4