Os12g0572700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exostosin-like family protein.
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Os12g0572700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exostosin-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.25 | 0.449 | 2.95 | -0.13 | 0.0755 | -6.31 | -0.29 | 21.1 | 0.11 | 5 | 0.6917 | 8 | -- | -- |
| 97.59 | 0.464 | 2.94 | -0.103 | 0.121 | 0.221 | -0.457 | -- | 0.0901 | 4.47 | 0.6917 | 8 | -- | -- |
| 90.98 | 0.444 | 2.95 | -0.128 | 0.076 | -5.99 | -- | 20.5 | 0.109 | 4.78 | 0.7984 | 5 | -- | -- |
| 98.14 | 0.461 | 2.93 | -0.102 | 0.116 | -0.281 | -- | -- | 0.0937 | 4.63 | 1.039 | 5 | -- | -- |
| 91.26 | 0.445 | 2.95 | -0.115 | -- | -5.99 | -- | 20.4 | 0.115 | -- | 0.7698 | 5 | -- | -- |
| 97.64 | 0.463 | 2.94 | -0.105 | 0.119 | -- | -0.468 | -- | 0.0905 | 4.47 | -- | -- | -- | -- |
| 98.23 | 0.464 | 2.93 | -0.102 | 0.116 | -- | -- | -- | 0.093 | 4.6 | -- | -- | -- | -- |
| 98.82 | 0.463 | 2.93 | -0.102 | -- | -0.347 | -- | -- | 0.0973 | -- | 1.24 | 5 | -- | -- |
| 98.41 | 0.465 | 2.93 | -- | 0.117 | 0.31 | -- | -- | 0.103 | 4.61 | 1.17 | 5 | -- | -- |
| 98.95 | 0.465 | 2.93 | -0.0972 | -- | -- | -- | -- | 0.096 | -- | -- | -- | -- | -- |
| 98.5 | 0.464 | 2.93 | -- | 0.114 | -- | -- | -- | 0.104 | 4.62 | -- | -- | -- | -- |
| 98.78 | 0.463 | 2.93 | -- | -- | -0.539 | -- | -- | 0.119 | -- | 0.5 | 5 | -- | -- |
| 99.2 | 0.465 | 2.93 | -- | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.29 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 13 | 80.29 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 65 | 81.71 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 19 |
| 69 | 81.71 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 117 | 85.23 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 129 | 85.84 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 134 | 86.40 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 156 | 87.58 | humidity | 90.0 | 30 | > th | dose independent | rect. | 1 | 2 |
| 164 | 87.92 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 1 |
| 184 | 88.16 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 189 | 88.20 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 191 | 88.29 | wind | 5.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 193 | 88.30 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 195 | 88.40 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 198 | 88.40 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 202 | 88.40 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 204 | 88.40 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 209 | 88.40 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 210 | 88.40 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 211 | 88.40 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 216 | 88.40 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 223 | 88.93 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 226 | 89.04 | wind | 9.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 262 | 89.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 263 | 89.47 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 272 | 89.62 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 278 | 89.68 | precipitation | 0.1 | 10 | < th | dose independent | sin | 13 | NA |
| 279 | 89.68 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 13 | NA |
| 282 | 89.71 | precipitation | 0.1 | 10 | > th | dose independent | sin | 13 | NA |
| 306 | 89.89 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 12 | NA |
| 439 | 90.56 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 530 | 90.72 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 585 | 90.91 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 591 | 90.94 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 592 | 90.94 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 596 | 90.99 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 599 | 91.02 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 608 | 91.12 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 7 |
| 616 | 91.12 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 624 | 91.13 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 643 | 91.13 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 670 | 91.15 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 679 | 91.15 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 696 | 91.19 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 733 | 91.19 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 902 | 91.49 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 23 |