Os12g0571600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0571600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.5 | 0.478 | 3.43 | -4.54 | 0.0121 | 21 | -0.95 | -202 | -0.0956 | 16.5 | 59.92 | 90 | 17 | 16 |
| 125.02 | 0.525 | 3 | -0.2 | 0.0698 | 0.55 | -0.798 | -- | -0.123 | 14.8 | 59.92 | 90 | 17 | 16 |
| 105.49 | 0.478 | 3.43 | -4.42 | 0.0847 | 20.8 | -- | -200 | -0.115 | 10.2 | 60.16 | 87 | 17 | 16 |
| 105.14 | 0.478 | 3.03 | -0.171 | 0.095 | 2.54 | -- | -- | -0.171 | 15.3 | 56 | 9 | 17.8 | 16.1 |
| 105.95 | 0.479 | 3.43 | -4.43 | -- | 20.8 | -- | -200 | -0.109 | -- | 60.18 | 87 | 17 | 16 |
| 126.17 | 0.527 | 3.01 | -0.191 | 0.0914 | -- | -0.749 | -- | -0.13 | 14.6 | -- | -- | -- | -- |
| 127.93 | 0.53 | 3.01 | -0.21 | 0.104 | -- | -- | -- | -0.135 | 12.2 | -- | -- | -- | -- |
| 102.67 | 0.472 | 3.03 | -0.192 | -- | 4.03 | -- | -- | -0.176 | -- | 55.87 | 9 | 17.8 | 16.1 |
| 103.71 | 0.474 | 3.04 | -- | 0.105 | 3.76 | -- | -- | -0.167 | 14.5 | 55.72 | 10 | 17.8 | 16.1 |
| 128.61 | 0.53 | 3.01 | -0.213 | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
| 129.1 | 0.531 | 3 | -- | 0.107 | -- | -- | -- | -0.112 | 12.3 | -- | -- | -- | -- |
| 102.34 | 0.471 | 3 | -- | -- | 4.44 | -- | -- | -0.104 | -- | 56.19 | 4 | 17.9 | 17.8 |
| 129.81 | 0.532 | 3 | -- | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.57 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 3 | 106.56 | humidity | 60 | 90 | < th | dose independent | rect. | 17 | 16 |
| 26 | 109.15 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 3 |
| 28 | 109.24 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 15 |
| 33 | 109.67 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 45 | 109.67 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 61 | 109.70 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 74 | 109.72 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 102 | 109.72 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 128 | 109.73 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 133 | 109.77 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 198 | 109.78 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 201 | 109.78 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 331 | 110.02 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 15 |
| 345 | 110.15 | radiation | 40 | 30 | > th | dose dependent | rect. | 14 | 20 |
| 346 | 110.16 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 541 | 111.13 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |
| 582 | 111.36 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |
| 595 | 111.47 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 625 | 111.89 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 766 | 112.89 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 1 |