Os12g0570300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0570300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.81 | 0.635 | 2.96 | -0.471 | 0.151 | -0.617 | 0.0243 | 5.24 | -0.00709 | 9.55 | 30 | 9 | -- | -- |
| 188.46 | 0.644 | 2.91 | -0.0492 | 0.178 | -0.257 | -0.0529 | -- | 0.0374 | 9.25 | 30 | 9 | -- | -- |
| 181.17 | 0.632 | 2.95 | -0.434 | 0.143 | -0.509 | -- | 4.39 | -0.0215 | 9.23 | 30 | 8 | -- | -- |
| 188.47 | 0.644 | 2.91 | -0.051 | 0.178 | -0.257 | -- | -- | 0.0373 | 9.29 | 30 | 8 | -- | -- |
| 182.35 | 0.632 | 2.96 | -0.45 | -- | -0.528 | -- | 4.56 | -0.023 | -- | 30 | 8 | -- | -- |
| 190.79 | 0.648 | 2.91 | -0.024 | 0.198 | -- | -0.0158 | -- | 0.0351 | 10.8 | -- | -- | -- | -- |
| 190.79 | 0.647 | 2.91 | -0.0246 | 0.198 | -- | -- | -- | 0.035 | 10.8 | -- | -- | -- | -- |
| 190.31 | 0.645 | 2.92 | -0.0529 | -- | -0.269 | -- | -- | 0.0383 | -- | 30 | 8 | -- | -- |
| 188.53 | 0.643 | 2.91 | -- | 0.178 | -0.253 | -- | -- | 0.043 | 9.33 | 30 | 8 | -- | -- |
| 193.22 | 0.65 | 2.92 | -0.0287 | -- | -- | -- | -- | 0.0338 | -- | -- | -- | -- | -- |
| 190.8 | 0.646 | 2.91 | -- | 0.199 | -- | -- | -- | 0.0378 | 10.8 | -- | -- | -- | -- |
| 190.38 | 0.645 | 2.92 | -- | -- | -0.266 | -- | -- | 0.0441 | -- | 30 | 8 | -- | -- |
| 193.24 | 0.649 | 2.92 | -- | -- | -- | -- | -- | 0.037 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.80 | temperature | 30.0 | 10 | > th | dose independent | rect. | 12 | 3 |
| 5 | 177.57 | radiation | 20.0 | 10 | > th | dose independent | rect. | 12 | 2 |
| 7 | 177.74 | humidity | 80.0 | 10 | > th | dose independent | rect. | 9 | 2 |
| 14 | 179.16 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 18 | 179.53 | wind | 5.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 20 | 179.56 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 37 | 180.00 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 2 |
| 48 | 180.67 | temperature | 30.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 68 | 180.96 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 88 | 181.10 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 22 |
| 89 | 181.13 | wind | 5.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 96 | 181.19 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 12 | 2 |
| 103 | 181.37 | temperature | 30.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 110 | 181.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 114 | 181.50 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 118 | 181.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 122 | 181.60 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 124 | 181.63 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 127 | 181.70 | humidity | 80.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 131 | 181.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 155 | 181.77 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 156 | 181.77 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 171 | 181.87 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 172 | 181.87 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 204 | 181.98 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 211 | 182.04 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 216 | 182.04 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 1 |
| 217 | 182.04 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 219 | 182.04 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 236 | 182.11 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 259 | 182.29 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 23 |
| 261 | 182.29 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 262 | 182.30 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 264 | 182.36 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 281 | 182.68 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 284 | 182.73 | temperature | 30.0 | 10 | < th | dose independent | sin | 0 | NA |
| 382 | 183.08 | temperature | 30.0 | 10 | > th | dose independent | sin | 21 | NA |
| 415 | 183.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 440 | 183.40 | temperature | 30.0 | 10 | < th | dose independent | no | NA | NA |
| 466 | 183.47 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 14 |
| 473 | 183.54 | temperature | 30.0 | 10 | < th | dose independent | sin | 17 | NA |
| 476 | 183.55 | temperature | 30.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 535 | 183.68 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 15 |
| 536 | 183.68 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 22 |
| 539 | 183.74 | temperature | 30.0 | 10 | > th | dose independent | no | NA | NA |
| 658 | 184.04 | wind | 1.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 663 | 184.09 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 667 | 184.16 | humidity | 90.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 691 | 184.49 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 10 |
| 692 | 184.49 | humidity | 50.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 693 | 184.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 696 | 184.53 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 2 |
| 702 | 184.57 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 725 | 184.61 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 726 | 184.61 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 727 | 184.61 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 749 | 184.66 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 14 |
| 750 | 184.67 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 10 |
| 753 | 184.70 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 10 |
| 763 | 184.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 14 |
| 770 | 184.84 | wind | 1.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 777 | 184.89 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 14 |
| 780 | 184.89 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 782 | 184.90 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 10 |
| 784 | 184.90 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 787 | 184.93 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 791 | 184.93 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 794 | 184.94 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 22 | 2 |
| 801 | 185.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 10 |
| 803 | 185.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 10 |
| 807 | 185.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 10 |
| 808 | 185.00 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 2 | 10 |
| 809 | 185.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 14 |
| 810 | 185.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 14 |
| 831 | 185.02 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 855 | 185.06 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 2 |
| 860 | 185.10 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 10 |
| 866 | 185.13 | wind | 1.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 869 | 185.14 | humidity | 50.0 | 10 | > th | dose independent | rect. | 12 | 14 |
| 878 | 185.20 | temperature | 30.0 | 10 | < th | dose independent | rect. | 10 | 23 |
| 882 | 185.22 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 1 |
| 885 | 185.22 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 888 | 185.23 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 901 | 185.28 | temperature | 30.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 903 | 185.28 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 934 | 185.32 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 23 |
| 940 | 185.34 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 942 | 185.35 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 943 | 185.36 | humidity | 80.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 946 | 185.37 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 948 | 185.39 | wind | 3.0 | 90 | > th | dose independent | rect. | 24 | 2 |
| 967 | 185.40 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 971 | 185.41 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 978 | 185.46 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 22 |
| 979 | 185.46 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 984 | 185.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 991 | 185.48 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |