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Os12g0569700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Non-cell-autonomous heat shock cognate protein 70.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.68 (0.0319) R2 : 0.11
β1 : -0.859 (0.117) R2dD : 0.109 R2D : 0.11
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0118 (0.0682) R2dN8 : 7.76e-05 R2N8 : 0.00103
σ : 0.6
deviance : 164.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
129.29 0.534 9.68 -0.861 0.471 0.733 0.253 -2.34 0.138 15.9 9.98 1377 -- --
137.97 0.547 9.68 -0.861 0.471 0.732 0.0693 -- 0.138 15.9 9.967 1318 -- --
129.44 0.53 9.68 -0.86 0.471 0.738 -- -2.31 0.138 15.9 9.968 1367 -- --
137.85 0.547 9.67 -0.844 0.456 0.721 -- -- 0.142 15.9 9.951 1318 -- --
140.82 0.553 9.68 -0.873 -- 0.828 -- -2.18 0.138 -- 9.625 1350 -- --
150.69 0.575 9.68 -0.842 0.498 -- 0.185 -- 0.0239 15.5 -- -- -- --
150.79 0.575 9.68 -0.838 0.499 -- -- -- 0.025 15.5 -- -- -- --
147.41 0.565 9.67 -0.814 -- 0.674 -- -- 0.146 -- 19.6 1294 -- --
151.86 0.574 9.65 -- 0.482 0.592 -- -- 0.214 16.1 15.58 1231 -- --
164.76 0.6 9.68 -0.859 -- -- -- -- 0.0118 -- -- -- -- --
169.32 0.609 9.66 -- 0.516 -- -- -- 0.118 15.4 -- -- -- --
161.61 0.592 9.63 -- -- 0.74 -- -- 0.243 -- 14.04 1308 -- --
184.25 0.634 9.66 -- -- -- -- -- 0.107 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 123.47 wind 5 270 < th dose independent rect. 11 19
2 123.91 wind 7 270 < th dose independent rect. 9 22
12 126.18 radiation 10 1440 < th dose independent rect. 9 5
29 128.16 radiation 10 1440 < th dose dependent rect. 9 4
32 128.30 wind 9 90 < th dose dependent rect. 13 18
33 128.32 temperature 20 90 > th dose independent rect. 7 20
35 128.47 radiation 10 1440 < th dose dependent rect. 8 6
37 128.51 wind 9 270 < th dose dependent rect. 11 19
41 128.62 radiation 20 1440 < th dose independent rect. 11 2
43 128.72 temperature 20 10 > th dose independent rect. 8 20
49 128.89 radiation 10 1440 < th dose independent rect. 8 19
51 128.90 radiation 10 1440 < th dose independent rect. 8 17
65 129.04 radiation 30 4320 > th dose independent rect. 16 16
73 129.21 radiation 10 1440 < th dose independent sin 0 NA
88 129.28 radiation 30 4320 > th dose independent rect. 7 1
108 129.29 wind 9 270 < th dose dependent rect. 10 21
128 129.48 wind 7 720 < th dose independent rect. 10 13
133 129.59 wind 7 720 < th dose independent rect. 4 18
135 129.65 radiation 10 1440 < th dose independent rect. 23 16
141 129.66 radiation 10 1440 < th dose independent rect. 2 13
165 129.84 wind 5 10 < th dose independent rect. 13 19
214 130.28 wind 7 720 < th dose independent rect. 11 11
217 130.31 radiation 30 14400 > th dose dependent rect. 7 1
250 130.35 wind 9 14400 > th dose dependent sin 6 NA
277 130.43 radiation 10 1440 < th dose independent no NA NA
285 130.43 radiation 10 1440 < th dose independent rect. 2 23
327 130.49 wind 9 14400 > th dose independent sin 6 NA
328 130.49 radiation 10 1440 < th dose independent rect. 12 23
396 130.89 radiation 10 1440 < th dose independent rect. 13 1
399 130.91 humidity 90 4320 > th dose dependent rect. 5 2
405 130.95 wind 7 720 < th dose independent rect. 10 6
406 130.96 wind 3 4320 < th dose independent rect. 8 1
417 130.97 temperature 20 270 > th dose independent rect. 5 21
432 131.13 wind 9 14400 < th dose independent sin 6 NA
434 131.15 wind 9 10 < th dose dependent rect. 13 19
440 131.21 radiation 10 4320 > th dose dependent rect. 7 1
466 131.32 radiation 30 4320 < th dose independent rect. 16 16
469 131.34 wind 7 720 < th dose independent rect. 13 9
473 131.35 radiation 10 4320 > th dose dependent rect. 17 15
487 131.45 wind 3 4320 > th dose independent rect. 8 1
508 131.54 wind 9 14400 > th dose independent rect. 21 18
511 131.54 wind 7 14400 > th dose dependent rect. 2 12
541 131.66 temperature 20 1440 > th dose independent rect. 6 1
546 131.68 radiation 1 4320 < th dose dependent rect. 23 6
548 131.70 humidity 90 4320 > th dose independent rect. 6 1
571 131.90 radiation 20 1440 < th dose dependent rect. 23 15
577 131.91 radiation 20 1440 < th dose dependent rect. 2 12
580 131.92 wind 7 720 < th dose independent rect. 17 23
582 131.92 radiation 20 1440 < th dose dependent rect. 4 10
591 131.97 wind 9 14400 > th dose dependent rect. 21 18
594 132.00 wind 9 14400 < th dose independent rect. 21 18
604 132.07 wind 9 270 < th dose dependent rect. 11 7
605 132.08 temperature 20 270 > th dose independent rect. 16 9
614 132.14 wind 5 4320 < th dose dependent rect. 8 1
616 132.16 wind 9 10 < th dose dependent rect. 15 17
641 132.32 radiation 1 4320 < th dose dependent rect. 19 10
643 132.34 wind 7 270 < th dose independent rect. 2 14
717 132.51 wind 9 14400 > th dose independent rect. 18 22
764 132.63 wind 9 14400 > th dose independent rect. 3 12
768 132.64 wind 9 14400 > th dose independent rect. 18 20
801 132.72 wind 9 14400 > th dose dependent rect. 18 22
802 132.73 radiation 20 4320 < th dose independent rect. 6 2
806 132.75 wind 9 720 > th dose dependent rect. 19 22
808 132.76 wind 9 720 > th dose independent rect. 15 22
815 132.78 temperature 20 1440 < th dose independent rect. 5 2
816 132.78 radiation 20 4320 < th dose independent rect. 19 13
823 132.80 radiation 20 4320 < th dose independent rect. 22 10
826 132.81 wind 9 14400 < th dose independent rect. 3 12
832 132.83 radiation 20 4320 < th dose independent rect. 2 6
842 132.85 radiation 20 4320 < th dose independent rect. 4 4
864 132.92 wind 9 720 > th dose independent rect. 19 22
868 132.93 wind 7 720 > th dose dependent rect. 14 22
888 133.01 wind 9 720 > th dose dependent rect. 14 3
919 133.17 radiation 1 4320 < th dose dependent rect. 3 2
939 133.24 wind 9 720 > th dose independent rect. 10 16
949 133.25 wind 9 720 > th dose independent no NA NA
966 133.25 wind 9 720 > th dose independent rect. 1 22
990 133.28 atmosphere 1010 14400 < th dose independent rect. 16 1
992 133.28 wind 9 720 > th dose independent rect. 10 13