Os12g0568700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0568700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF588 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 240.34 | 0.728 | 10.1 | 1.25 | 0.473 | 2.03 | -1.32 | -0.709 | 0.59 | 19.3 | 24.23 | 1183 | -- | -- |
| 240.56 | 0.722 | 10.1 | 1.42 | 0.485 | 1.95 | -1.36 | -- | 0.64 | 19.4 | 24.23 | 1182 | -- | -- |
| 244.92 | 0.729 | 10.1 | 1.24 | 0.49 | 2.01 | -- | -0.864 | 0.587 | 19.5 | 24.4 | 1202 | -- | -- |
| 245.31 | 0.729 | 10.1 | 1.46 | 0.498 | 1.92 | -- | -- | 0.639 | 19.6 | 24.26 | 1206 | -- | -- |
| 253.55 | 0.742 | 10.1 | 1.13 | -- | 2.19 | -- | -1.41 | 0.577 | -- | 24.54 | 1091 | -- | -- |
| 365.83 | 0.897 | 10 | 2.03 | 0.651 | -- | -0.695 | -- | 0.915 | 21.5 | -- | -- | -- | -- |
| 367.42 | 0.898 | 10 | 2.06 | 0.651 | -- | -- | -- | 0.914 | 21.9 | -- | -- | -- | -- |
| 254.27 | 0.743 | 10.1 | 1.45 | -- | 2.08 | -- | -- | 0.625 | -- | 24.1 | 1079 | -- | -- |
| 297 | 0.803 | 10.1 | -- | 0.542 | 2.18 | -- | -- | 0.414 | 19.9 | 23.93 | 1255 | -- | -- |
| 392.81 | 0.926 | 9.99 | 2.06 | -- | -- | -- | -- | 0.914 | -- | -- | -- | -- | -- |
| 478.84 | 1.02 | 10.1 | -- | 0.659 | -- | -- | -- | 0.685 | 22.1 | -- | -- | -- | -- |
| 305.32 | 0.814 | 10.1 | -- | -- | 2.38 | -- | -- | 0.392 | -- | 23.74 | 1095 | -- | -- |
| 505.1 | 1.05 | 10 | -- | -- | -- | -- | -- | 0.685 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 3 | 245.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 9 | 245.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 13 | 245.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 25 | 246.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 29 | 246.27 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 48 | 246.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 117 | 247.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 163 | 248.19 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 183 | 248.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 184 | 248.39 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 286 | 249.97 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 297 | 250.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 311 | 250.81 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 313 | 250.89 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 320 | 251.14 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 333 | 251.67 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 12 |
| 339 | 251.78 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 343 | 251.93 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 403 | 254.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 405 | 254.77 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 19 |
| 413 | 254.83 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 420 | 255.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 427 | 255.48 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 428 | 255.53 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 429 | 255.62 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 440 | 255.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 448 | 255.66 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 454 | 255.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 455 | 255.96 | radiation | 1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 457 | 256.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 479 | 256.47 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 482 | 256.52 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 485 | 256.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 486 | 256.58 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 487 | 256.59 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 502 | 256.65 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 516 | 256.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 524 | 256.96 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 525 | 256.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 528 | 257.03 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 529 | 257.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 532 | 257.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 537 | 257.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 21 |
| 541 | 257.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 542 | 257.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 557 | 257.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 559 | 257.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 560 | 257.20 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 565 | 257.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 575 | 257.22 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 594 | 257.37 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 7 |
| 595 | 257.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 12 |
| 598 | 257.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 599 | 257.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 616 | 257.46 | radiation | 10 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 617 | 257.48 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 620 | 257.50 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 622 | 257.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 623 | 257.52 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 624 | 257.53 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 625 | 257.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 628 | 257.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 636 | 257.58 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 639 | 257.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 640 | 257.63 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 647 | 257.70 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 658 | 257.80 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 662 | 257.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 669 | 257.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 670 | 257.86 | temperature | 30 | 1440 | < th | dose independent | sin | 20 | NA |
| 671 | 257.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 675 | 257.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 694 | 257.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 705 | 257.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 707 | 257.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 718 | 257.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 721 | 258.00 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 722 | 258.00 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 740 | 258.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 21 |
| 758 | 258.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 759 | 258.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 763 | 258.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 768 | 258.11 | temperature | 30 | 1440 | > th | dose independent | sin | 19 | NA |
| 788 | 258.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 793 | 258.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 796 | 258.14 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 821 | 258.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 824 | 258.19 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 831 | 258.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 833 | 258.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 834 | 258.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 836 | 258.22 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 951 | 258.39 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 953 | 258.40 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 974 | 258.49 | radiation | 30 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 991 | 258.51 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |