FiT-DB / Search/ Help/ Sample detail

Os12g0566700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0205) R2 : 0.579
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.25 (0.05) R2dC : 0.582 R2C : 0.578
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0393 (0.043) R2dN8 : 0.000995 R2N8 : -0.00246
σ : 0.386
deviance : 68.06
__
_____
C
peak time of C : 9.79
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.78 0.357 10.6 0.144 1.26 -0.835 0.436 -0.0954 0.0108 9.91 80 1369 -- --
57.33 0.353 10.6 0.116 1.27 -0.865 0.461 -- 0.0139 9.95 79 1356 -- --
58.12 0.355 10.6 0.131 1.3 -0.854 -- -0.00553 0.015 9.97 79 1339 -- --
58.04 0.355 10.6 0.138 1.26 -0.861 -- -- 0.019 9.99 78.45 1355 -- --
142.37 0.559 10.6 0.13 -- -0.408 -- 0.0854 0.0748 -- 79 1339 -- --
66.52 0.382 10.6 0.164 1.26 -- 0.427 -- 0.0583 9.75 -- -- -- --
67.2 0.384 10.6 0.181 1.25 -- -- -- 0.0595 9.8 -- -- -- --
140.09 0.551 10.6 0.253 -- 0.795 -- -- 0.0747 -- 71.08 787 -- --
58.55 0.356 10.6 -- 1.26 -0.875 -- -- 0.00279 9.98 78.8 1355 -- --
160.85 0.593 10.6 0.168 -- -- -- -- 0.0604 -- -- -- -- --
68.06 0.386 10.6 -- 1.25 -- -- -- 0.0393 9.79 -- -- -- --
138.93 0.549 10.6 -- -- 0.826 -- -- 0.0686 -- 74 804 -- --
161.59 0.593 10.7 -- -- -- -- -- 0.0417 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.91 precipitation 0.1 270 > th dose independent rect. 2 2
2 53.91 temperature 20.0 270 > th dose independent rect. 21 6
3 53.94 precipitation 0.1 270 > th dose dependent rect. 2 2
14 54.79 precipitation 0.1 270 > th dose independent rect. 24 4
21 55.06 precipitation 0.1 270 > th dose dependent rect. 24 4
24 55.20 humidity 70.0 270 > th dose dependent rect. 21 6
27 55.31 humidity 50.0 720 > th dose dependent rect. 17 10
32 55.45 radiation 1.0 90 < th dose dependent sin 8 NA
33 55.45 humidity 60.0 270 > th dose dependent rect. 20 8
34 55.46 wind 1.0 270 > th dose independent sin 18 NA
35 55.46 radiation 1.0 90 < th dose independent sin 8 NA
41 55.54 humidity 80.0 270 > th dose independent rect. 21 7
59 55.83 temperature 10.0 270 > th dose dependent rect. 21 7
83 56.11 precipitation 0.1 270 < th dose independent rect. 4 17
84 56.11 precipitation 0.1 270 < th dose dependent rect. 4 17
92 56.20 humidity 70.0 10 > th dose dependent rect. 22 8
94 56.22 humidity 70.0 10 > th dose dependent sin 10 NA
104 56.34 wind 1.0 270 < th dose independent rect. 11 15
107 56.36 radiation 1.0 90 < th dose independent rect. 21 11
110 56.37 radiation 1.0 90 < th dose independent rect. 21 14
117 56.40 precipitation 0.1 270 < th dose independent rect. 3 19
118 56.40 precipitation 0.1 270 < th dose dependent rect. 3 19
127 56.47 humidity 90.0 720 > th dose dependent rect. 20 4
137 56.50 radiation 1.0 90 < th dose dependent rect. 21 11
139 56.50 radiation 1.0 90 < th dose dependent rect. 21 14
147 56.54 temperature 10.0 10 > th dose dependent rect. 22 8
148 56.56 atmosphere 1015.0 270 < th dose independent rect. 21 7
156 56.59 radiation 1.0 1440 < th dose dependent rect. 7 10
158 56.60 temperature 20.0 10 > th dose independent rect. 24 5
161 56.62 radiation 1.0 90 < th dose independent rect. 21 20
164 56.64 humidity 50.0 720 > th dose dependent sin 13 NA
165 56.64 radiation 1.0 90 < th dose dependent rect. 21 22
166 56.65 radiation 1.0 90 < th dose independent rect. 21 18
185 56.70 radiation 1.0 90 < th dose dependent rect. 21 20
192 56.73 wind 3.0 30 < th dose dependent rect. 22 6
206 56.81 radiation 1.0 1440 < th dose independent rect. 11 1
209 56.81 radiation 1.0 1440 < th dose dependent rect. 11 1
234 56.91 humidity 80.0 720 < th dose independent rect. 19 1
240 56.93 humidity 90.0 720 > th dose dependent rect. 20 1
243 56.94 humidity 60.0 720 > th dose dependent rect. 18 1
247 56.96 wind 9.0 270 < th dose independent rect. 21 7
250 56.97 temperature 10.0 270 > th dose independent rect. 21 7
251 56.97 temperature 30.0 270 < th dose independent rect. 21 7
252 56.97 humidity 50.0 270 > th dose independent rect. 21 7
255 56.97 atmosphere 995.0 270 > th dose independent rect. 21 7
256 56.97 radiation 1.0 270 < th dose independent rect. 21 7
261 56.97 temperature 10.0 270 > th dose independent rect. 4 17
262 56.97 radiation 1.0 90 < th dose independent rect. 21 22
263 56.97 radiation 1.0 270 < th dose dependent rect. 21 7
278 57.04 atmosphere 1015.0 270 < th dose independent rect. 22 5
284 57.05 temperature 30.0 30 < th dose independent rect. 6 16
287 57.06 humidity 50.0 720 > th dose dependent rect. 16 16
291 57.07 humidity 60.0 720 > th dose dependent rect. 17 6
298 57.09 atmosphere 1015.0 270 < th dose dependent rect. 22 6
304 57.11 wind 1.0 270 > th dose independent rect. 3 18
305 57.12 atmosphere 995.0 270 > th dose independent rect. 4 17
342 57.22 humidity 70.0 720 > th dose independent rect. 15 13
376 57.30 atmosphere 1005.0 720 < th dose independent rect. 19 6
381 57.31 atmosphere 1015.0 10 < th dose dependent rect. 22 8
385 57.32 wind 1.0 270 < th dose independent rect. 23 3
390 57.33 wind 3.0 270 < th dose dependent rect. 23 2
393 57.34 precipitation 0.1 270 < th dose independent rect. 17 14
402 57.34 precipitation 0.1 270 < th dose dependent rect. 17 14
417 57.37 humidity 80.0 10 > th dose dependent rect. 24 4
428 57.38 wind 3.0 30 < th dose dependent rect. 13 15
434 57.40 humidity 60.0 720 > th dose dependent rect. 17 4
457 57.44 atmosphere 1015.0 10 < th dose independent rect. 22 8
463 57.45 precipitation 0.1 270 < th dose independent rect. 21 7
464 57.45 precipitation 0.1 270 < th dose dependent rect. 21 7
466 57.46 wind 7.0 270 < th dose independent rect. 11 15
468 57.47 atmosphere 1015.0 270 < th dose independent rect. 4 17
471 57.48 temperature 10.0 270 > th dose independent rect. 22 5
472 57.48 temperature 30.0 270 < th dose independent rect. 22 5
473 57.48 humidity 50.0 270 > th dose independent rect. 22 5
476 57.48 atmosphere 995.0 270 > th dose independent rect. 22 5
477 57.48 radiation 1.0 270 < th dose independent rect. 22 5
484 57.48 temperature 10.0 270 > th dose independent rect. 3 19
487 57.48 radiation 1.0 270 < th dose dependent rect. 22 5
493 57.49 wind 9.0 270 < th dose independent rect. 22 5
507 57.51 humidity 80.0 10 > th dose dependent rect. 22 12
521 57.53 wind 3.0 30 < th dose dependent rect. 15 13
523 57.54 precipitation 0.1 270 < th dose independent rect. 2 9
528 57.54 precipitation 0.1 270 < th dose dependent rect. 2 9
530 57.55 precipitation 0.1 270 < th dose independent rect. 22 5
533 57.55 precipitation 0.1 270 < th dose dependent rect. 22 5
534 57.55 wind 9.0 270 < th dose dependent rect. 21 7
538 57.56 atmosphere 995.0 270 > th dose independent rect. 3 19
544 57.57 humidity 90.0 30 > th dose independent sin 8 NA
584 57.61 wind 1.0 270 < th dose independent sin 18 NA
585 57.61 humidity 80.0 30 > th dose independent rect. 22 8
595 57.61 humidity 70.0 90 > th dose dependent rect. 14 15
613 57.64 atmosphere 1005.0 720 < th dose independent rect. 19 4
620 57.64 temperature 10.0 270 > th dose dependent rect. 7 9
636 57.66 wind 9.0 270 < th dose independent rect. 4 17
665 57.68 temperature 10.0 270 > th dose dependent rect. 9 17
680 57.71 precipitation 0.1 270 < th dose independent rect. 1 23
682 57.71 precipitation 0.1 270 < th dose dependent rect. 1 23
683 57.72 humidity 70.0 1440 > th dose independent rect. 14 4
684 57.72 wind 1.0 270 < th dose independent rect. 21 5
690 57.73 wind 9.0 270 < th dose dependent rect. 12 15
720 57.76 humidity 90.0 10 < th dose independent rect. 6 16
722 57.76 humidity 80.0 1440 < th dose independent rect. 23 21
738 57.78 radiation 1.0 30 < th dose independent rect. 24 6
740 57.78 humidity 80.0 1440 < th dose independent rect. 19 22
746 57.79 temperature 20.0 270 > th dose independent rect. 10 16
747 57.79 humidity 80.0 1440 > th dose independent rect. 19 22
751 57.79 humidity 90.0 720 > th dose dependent rect. 8 17
759 57.81 humidity 70.0 720 > th dose independent rect. 17 2
763 57.81 humidity 80.0 1440 > th dose independent rect. 23 21
777 57.83 humidity 80.0 1440 < th dose independent sin 0 NA
778 57.83 radiation 1.0 30 > th dose independent sin 4 NA
785 57.84 precipitation 0.1 30 < th dose independent sin 3 NA
789 57.84 atmosphere 995.0 10 > th dose independent rect. 6 16
790 57.84 humidity 80.0 1440 < th dose independent rect. 3 17
794 57.84 precipitation 0.1 30 < th dose dependent sin 3 NA
821 57.87 humidity 80.0 1440 > th dose independent sin 0 NA
843 57.89 humidity 50.0 10 > th dose independent rect. 6 16
849 57.90 humidity 70.0 1440 < th dose independent rect. 14 4
854 57.90 humidity 80.0 1440 > th dose independent rect. 3 17
856 57.90 temperature 30.0 30 < th dose independent rect. 6 18
883 57.92 humidity 80.0 1440 < th dose independent rect. 23 18
891 57.93 humidity 90.0 30 > th dose independent rect. 24 4
892 57.93 humidity 70.0 1440 > th dose independent rect. 12 7
894 57.93 humidity 80.0 1440 < th dose independent rect. 3 14
899 57.93 humidity 80.0 1440 > th dose independent rect. 23 18
920 57.94 humidity 90.0 720 < th dose dependent rect. 19 1
927 57.95 humidity 80.0 1440 < th dose independent rect. 11 2
949 57.96 humidity 80.0 1440 < th dose independent rect. 1 16
953 57.96 humidity 80.0 1440 > th dose independent rect. 21 20
962 57.96 atmosphere 1005.0 10 < th dose dependent rect. 24 8
991 57.98 humidity 70.0 1440 < th dose independent rect. 15 2