Os12g0566200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0566200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.7 | 0.354 | 7.91 | 0.727 | 1.09 | 1.96 | 0.523 | -1.08 | -0.0474 | 15.5 | 0.78 | 756 | -- | -- |
| 56.98 | 0.352 | 7.91 | 0.726 | 1.25 | 2.28 | 1.14 | -- | -0.0302 | 16 | 0.4728 | 767 | -- | -- |
| 56.84 | 0.351 | 7.91 | 0.78 | 1.09 | 2.11 | -- | -1.52 | -0.0338 | 15.8 | 0.54 | 779 | -- | -- |
| 59.85 | 0.36 | 7.91 | 0.769 | 1.07 | 2.29 | -- | -- | -0.0246 | 16.2 | 0.603 | 822 | -- | -- |
| 63.79 | 0.372 | 7.9 | 0.758 | -- | 1.53 | -- | -1.43 | -0.0273 | -- | 0.7664 | 1048 | -- | -- |
| 68.95 | 0.389 | 7.9 | 0.513 | 0.911 | -- | 0.0648 | -- | -0.127 | 9.05 | -- | -- | -- | -- |
| 68.96 | 0.389 | 7.9 | 0.515 | 0.911 | -- | -- | -- | -0.127 | 9.03 | -- | -- | -- | -- |
| 63.92 | 0.372 | 7.9 | 0.725 | -- | 1.53 | -- | -- | -0.016 | -- | 0.6001 | 1084 | -- | -- |
| 72.43 | 0.396 | 7.91 | -- | 0.498 | 1.23 | -- | -- | -0.0846 | 13.4 | 1.2 | 856 | -- | -- |
| 116.69 | 0.505 | 7.92 | 0.514 | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
| 75.96 | 0.408 | 7.91 | -- | 0.912 | -- | -- | -- | -0.185 | 8.99 | -- | -- | -- | -- |
| 76.64 | 0.408 | 7.92 | -- | -- | 1.38 | -- | -- | -0.111 | -- | 1.26 | 1044 | -- | -- |
| 123.66 | 0.519 | 7.94 | -- | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.00 | radiation | 1 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 4 | 51.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 10 | 51.81 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 8 |
| 15 | 51.99 | radiation | 1 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 24 | 52.23 | radiation | 1 | 720 | < th | dose independent | rect. | 16 | 8 |
| 37 | 52.50 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 79 | 53.26 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 19 |
| 93 | 53.46 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 17 |
| 124 | 53.75 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 178 | 54.22 | radiation | 20 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 192 | 54.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 200 | 54.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 205 | 54.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 213 | 54.43 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 4 |
| 238 | 54.50 | radiation | 20 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 262 | 54.64 | radiation | 1 | 720 | < th | dose dependent | sin | 16 | NA |
| 265 | 54.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 291 | 54.80 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 2 |
| 350 | 55.15 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 21 |
| 353 | 55.16 | radiation | 1 | 720 | > th | dose independent | rect. | 8 | 11 |
| 391 | 55.31 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 3 |
| 434 | 55.48 | temperature | 25 | 270 | < th | dose dependent | sin | 11 | NA |
| 478 | 55.74 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 489 | 55.79 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 524 | 55.87 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 1 |
| 536 | 55.92 | radiation | 1 | 720 | > th | dose independent | sin | 15 | NA |
| 551 | 55.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 566 | 55.99 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 589 | 56.07 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 608 | 56.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 644 | 56.25 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 669 | 56.32 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 8 |
| 719 | 56.50 | radiation | 1 | 720 | < th | dose independent | sin | 18 | NA |
| 727 | 56.51 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 729 | 56.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 798 | 56.73 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 813 | 56.78 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 940 | 57.04 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 944 | 57.05 | temperature | 25 | 720 | > th | dose independent | rect. | 9 | 17 |