Os12g0563000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phospholipid/glycerol acyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0563000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Phospholipid/glycerol acyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.56 | 0.614 | 5.66 | -0.385 | 0.439 | 0.814 | 0.0115 | 2.37 | -0.0593 | 11.5 | 68.47 | 5402 | -- | -- |
| 177.71 | 0.621 | 5.65 | -0.423 | 0.431 | 0.957 | -0.167 | -- | -0.0111 | 11.5 | 67.81 | 5376 | -- | -- |
| 170.56 | 0.608 | 5.66 | -0.384 | 0.438 | 0.812 | -- | 2.37 | -0.0592 | 11.5 | 68.49 | 5408 | -- | -- |
| 177.8 | 0.621 | 5.65 | -0.44 | 0.446 | 0.967 | -- | -- | -0.0113 | 11.4 | 67.83 | 5376 | -- | -- |
| 180.95 | 0.627 | 5.68 | -0.381 | -- | 0.773 | -- | 2.34 | -0.074 | -- | 68 | 6061 | -- | -- |
| 191.37 | 0.649 | 5.65 | -0.484 | 0.353 | -- | -0.218 | -- | -0.0306 | 11.6 | -- | -- | -- | -- |
| 191.56 | 0.648 | 5.65 | -0.493 | 0.355 | -- | -- | -- | -0.0319 | 11.4 | -- | -- | -- | -- |
| 186.88 | 0.637 | 5.65 | -0.478 | -- | 0.883 | -- | -- | 0.00407 | -- | 67 | 4643 | -- | -- |
| 183.08 | 0.63 | 5.64 | -- | 0.456 | 1 | -- | -- | 0.0332 | 11.5 | 68 | 5381 | -- | -- |
| 199.47 | 0.66 | 5.66 | -0.503 | -- | -- | -- | -- | -0.0356 | -- | -- | -- | -- | -- |
| 197.97 | 0.658 | 5.64 | -- | 0.361 | -- | -- | -- | 0.023 | 11.5 | -- | -- | -- | -- |
| 193 | 0.647 | 5.65 | -- | -- | 0.937 | -- | -- | 0.0306 | -- | 67.03 | 4644 | -- | -- |
| 206.13 | 0.67 | 5.65 | -- | -- | -- | -- | -- | 0.0202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.82 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 2 | 166.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 6 | 167.37 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 8 | 167.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 10 | 167.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 27 | 168.38 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 33 | 168.91 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 40 | 169.05 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 43 | 169.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 94 | 170.33 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 99 | 170.42 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 101 | 170.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 105 | 170.50 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 124 | 170.73 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 125 | 170.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 126 | 170.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 127 | 170.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 131 | 170.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 132 | 170.83 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 143 | 170.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 149 | 170.99 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 152 | 171.01 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 159 | 171.16 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 169 | 171.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 178 | 171.30 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 186 | 171.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 190 | 171.37 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 193 | 171.41 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 212 | 171.51 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 216 | 171.55 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 220 | 171.56 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 226 | 171.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 227 | 171.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 233 | 171.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 241 | 171.70 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 18 |
| 247 | 171.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 257 | 171.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 260 | 171.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 284 | 171.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 288 | 171.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 289 | 171.84 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 297 | 171.88 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 300 | 171.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 307 | 171.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 308 | 171.90 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 314 | 171.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 323 | 171.94 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 346 | 172.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 350 | 172.01 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 355 | 172.03 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 392 | 172.10 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 406 | 172.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 417 | 172.14 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 434 | 172.18 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 489 | 172.32 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 501 | 172.34 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 3 | NA |
| 506 | 172.34 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 3 | NA |
| 521 | 172.38 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 531 | 172.40 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 582 | 172.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 584 | 172.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 614 | 172.50 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 621 | 172.52 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 629 | 172.55 | temperature | 25.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 637 | 172.56 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 658 | 172.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 665 | 172.64 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 673 | 172.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 675 | 172.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 690 | 172.67 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 695 | 172.68 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 762 | 172.83 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 776 | 172.84 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 17 |
| 795 | 172.87 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 819 | 172.93 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 830 | 172.95 | temperature | 25.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 899 | 173.02 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 957 | 173.10 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 965 | 173.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 976 | 173.15 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 8 | NA |