Os12g0559100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0559100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 295.71 | 0.808 | 4.63 | 1.49 | 0.586 | 0.847 | -1.34 | 3.24 | 0.501 | 21.2 | 24.86 | 1341 | -- | -- |
| 299.59 | 0.806 | 4.74 | 0.573 | 0.585 | 1.18 | -1.34 | -- | 0.252 | 21.3 | 24.81 | 1395 | -- | -- |
| 300.85 | 0.808 | 4.61 | 1.58 | 0.644 | 0.765 | -- | 3.24 | 0.534 | 21.9 | 25.27 | 1412 | -- | -- |
| 303.45 | 0.811 | 4.74 | 0.653 | 0.625 | 1.12 | -- | -- | 0.257 | 22.2 | 24.81 | 1440 | -- | -- |
| 318.5 | 0.831 | 4.65 | 1.29 | -- | 1.12 | -- | 2.52 | 0.419 | -- | 24.18 | 2354 | -- | -- |
| 352.7 | 0.88 | 4.7 | 1.01 | 0.669 | -- | -0.84 | -- | 0.422 | 22.2 | -- | -- | -- | -- |
| 355.02 | 0.882 | 4.7 | 1.04 | 0.673 | -- | -- | -- | 0.421 | 22.8 | -- | -- | -- | -- |
| 320.48 | 0.834 | 4.74 | 0.583 | -- | 1.37 | -- | -- | 0.219 | -- | 23.93 | 2369 | -- | -- |
| 313.72 | 0.825 | 4.76 | -- | 0.625 | 1.25 | -- | -- | 0.18 | 22.4 | 24.36 | 1490 | -- | -- |
| 383.05 | 0.915 | 4.68 | 1.06 | -- | -- | -- | -- | 0.425 | -- | -- | -- | -- | -- |
| 383.76 | 0.916 | 4.73 | -- | 0.681 | -- | -- | -- | 0.305 | 22.9 | -- | -- | -- | -- |
| 329.12 | 0.845 | 4.75 | -- | -- | 1.52 | -- | -- | 0.114 | -- | 23.6 | 2368 | -- | -- |
| 412.57 | 0.948 | 4.71 | -- | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 294.37 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 3 | 294.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 13 |
| 4 | 295.11 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 14 |
| 8 | 295.33 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 12 | 295.42 | temperature | 25 | 1440 | > th | dose dependent | sin | 6 | NA |
| 21 | 295.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 24 | 295.70 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 25 | 295.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 32 | 295.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 20 |
| 55 | 295.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 66 | 296.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 75 | 296.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 80 | 296.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 107 | 296.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 120 | 296.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 131 | 296.22 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 152 | 296.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 155 | 296.26 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 159 | 296.27 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 188 | 296.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 191 | 296.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 197 | 296.33 | temperature | 30 | 1440 | < th | dose independent | sin | 21 | NA |
| 199 | 296.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 232 | 296.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 274 | 296.47 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 311 | 296.55 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 324 | 296.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 338 | 296.61 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 474 | 296.67 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 493 | 296.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 516 | 296.71 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 577 | 296.85 | temperature | 30 | 1440 | > th | dose independent | sin | 20 | NA |
| 600 | 296.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 640 | 297.05 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 645 | 297.11 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 646 | 297.11 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 741 | 297.13 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 906 | 297.73 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 955 | 297.95 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |