Os12g0557800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os12g0557800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.32 | 0.534 | 6.63 | 0.599 | 1.94 | 1.83 | -1.12 | -1.14 | 0.0822 | 16.4 | 18.19 | 48 | -- | -- |
| 130.32 | 0.532 | 6.6 | 0.776 | 1.93 | 1.82 | -1.46 | -- | 0.131 | 16.4 | 17.95 | 47 | -- | -- |
| 131.89 | 0.535 | 6.64 | 0.469 | 1.94 | 1.81 | -- | -1.88 | 0.0488 | 16.4 | 18.2 | 54 | -- | -- |
| 135.95 | 0.543 | 6.61 | 0.786 | 1.95 | 1.77 | -- | -- | 0.137 | 16.4 | 17.8 | 49 | -- | -- |
| 260.05 | 0.751 | 6.71 | -0.169 | -- | 3.42 | -- | -5.39 | -0.228 | -- | 23.57 | 123 | -- | -- |
| 173.85 | 0.618 | 6.54 | 1.19 | 2.51 | -- | -1.03 | -- | 0.431 | 16 | -- | -- | -- | -- |
| 176.9 | 0.623 | 6.54 | 1.18 | 2.5 | -- | -- | -- | 0.426 | 16 | -- | -- | -- | -- |
| 274.63 | 0.772 | 6.65 | 0.422 | -- | 3.2 | -- | -- | -0.144 | -- | 20.28 | 122 | -- | -- |
| 150.47 | 0.571 | 6.63 | -- | 1.84 | 2.13 | -- | -- | 0.0111 | 16.4 | 16.98 | 63 | -- | -- |
| 518.87 | 1.06 | 6.53 | 1.07 | -- | -- | -- | -- | 0.359 | -- | -- | -- | -- | -- |
| 213.38 | 0.683 | 6.57 | -- | 2.48 | -- | -- | -- | 0.295 | 16 | -- | -- | -- | -- |
| 277.49 | 0.776 | 6.66 | -- | -- | 3.53 | -- | -- | -0.222 | -- | 18 | 132 | -- | -- |
| 549.3 | 1.09 | 6.56 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 3 | 117.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 4 | 118.27 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 5 | 118.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 7 | 118.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 12 | 119.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 86 | 124.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 87 | 124.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 208 | 128.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 211 | 128.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 212 | 128.13 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 20 |
| 226 | 128.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 271 | 129.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 332 | 130.26 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 364 | 130.64 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 372 | 130.76 | temperature | 30 | 30 | < th | dose dependent | sin | 0 | NA |
| 386 | 130.88 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 411 | 131.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 416 | 131.37 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 538 | 133.12 | temperature | 20 | 270 | > th | dose dependent | sin | 7 | NA |
| 540 | 133.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 617 | 133.96 | temperature | 20 | 90 | > th | dose dependent | sin | 3 | NA |
| 632 | 134.12 | temperature | 25 | 270 | > th | dose independent | rect. | 19 | 21 |
| 688 | 134.72 | temperature | 10 | 90 | > th | dose dependent | sin | 4 | NA |
| 690 | 134.73 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 709 | 134.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 734 | 135.17 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 9 |
| 761 | 135.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 861 | 136.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 10 |