Os12g0557400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0557400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.3 | 0.171 | 12.2 | 0.757 | 0.253 | 0.433 | -0.319 | 0.294 | 0.23 | 16.6 | 26.1 | 1334 | -- | -- |
| 13.39 | 0.17 | 12.2 | 0.808 | 0.251 | 0.411 | -0.302 | -- | 0.242 | 16.6 | 26.87 | 1343 | -- | -- |
| 13.57 | 0.172 | 12.2 | 0.761 | 0.25 | 0.431 | -- | 0.25 | 0.228 | 16.6 | 26.08 | 1338 | -- | -- |
| 13.62 | 0.172 | 12.2 | 0.811 | 0.249 | 0.413 | -- | -- | 0.242 | 16.6 | 26.62 | 1325 | -- | -- |
| 16.77 | 0.191 | 12.2 | 0.76 | -- | 0.474 | -- | 0.282 | 0.229 | -- | 27 | 1239 | -- | -- |
| 15.79 | 0.186 | 12.3 | 0.69 | 0.276 | -- | -0.309 | -- | 0.151 | 16.4 | -- | -- | -- | -- |
| 16.05 | 0.188 | 12.3 | 0.687 | 0.274 | -- | -- | -- | 0.15 | 16.4 | -- | -- | -- | -- |
| 16.8 | 0.191 | 12.2 | 0.819 | -- | 0.465 | -- | -- | 0.248 | -- | 27.8 | 1239 | -- | -- |
| 28.47 | 0.25 | 12.3 | -- | 0.274 | 0.0553 | -- | -- | 0.0797 | 16.3 | 38.6 | 1499 | -- | -- |
| 20.08 | 0.209 | 12.3 | 0.677 | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
| 28.5 | 0.25 | 12.3 | -- | 0.261 | -- | -- | -- | 0.0731 | 16.5 | -- | -- | -- | -- |
| 26.07 | 0.238 | 12.3 | -- | -- | -0.396 | -- | -- | -0.0514 | -- | 42.46 | 47520 | -- | -- |
| 32.16 | 0.265 | 12.3 | -- | -- | -- | -- | -- | 0.0673 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.86 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 2 | 12.86 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 40 | 12.99 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 49 | 13.00 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 72 | 13.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 73 | 13.02 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 104 | 13.04 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 157 | 13.07 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 185 | 13.09 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 231 | 13.11 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 289 | 13.13 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 402 | 13.18 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 443 | 13.19 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 499 | 13.21 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 530 | 13.22 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 10 | NA |
| 590 | 13.24 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 608 | 13.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 616 | 13.24 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 683 | 13.26 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 696 | 13.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 717 | 13.27 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 727 | 13.27 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 791 | 13.29 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 878 | 13.31 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |