Os12g0555500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Probenazole-inducible protein PBZ1.
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Os12g0555500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Probenazole-inducible protein PBZ1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.13 | 0.53 | 14.6 | 0.888 | 0.499 | 2.05 | -0.0292 | 2.58 | 0.652 | 23.9 | 0.9299 | 14446 | -- | -- |
| 141.89 | 0.555 | 14.5 | 0.618 | 0.691 | 1.98 | 0.269 | -- | 0.694 | 23.6 | 1.49 | 11737 | -- | -- |
| 125.79 | 0.522 | 14.6 | 0.899 | 0.516 | 2.07 | -- | 2.53 | 0.632 | 23.9 | 1.02 | 14462 | -- | -- |
| 130.32 | 0.532 | 14.6 | 0.341 | 0.511 | 1.7 | -- | -- | 0.525 | 23.5 | 1.62 | 14457 | -- | -- |
| 129.24 | 0.529 | 14.6 | 0.915 | -- | 2.18 | -- | 2.44 | 0.62 | -- | 1.17 | 14199 | -- | -- |
| 200.05 | 0.663 | 14.5 | 0.986 | 0.506 | -- | 0.0192 | -- | 1.01 | 0.15 | -- | -- | -- | -- |
| 200.05 | 0.662 | 14.5 | 0.985 | 0.506 | -- | -- | -- | 1.01 | 0.149 | -- | -- | -- | -- |
| 132.91 | 0.537 | 14.6 | 0.426 | -- | 1.88 | -- | -- | 0.465 | -- | 1.66 | 15597 | -- | -- |
| 124.32 | 0.519 | 14.6 | -- | 0.527 | 1.71 | -- | -- | 0.46 | 23.6 | 1.181 | 30329 | -- | -- |
| 216.14 | 0.687 | 14.5 | 1 | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
| 225.65 | 0.703 | 14.5 | -- | 0.519 | -- | -- | -- | 0.901 | 0.253 | -- | -- | -- | -- |
| 127.29 | 0.525 | 14.6 | -- | -- | 2.06 | -- | -- | 0.338 | -- | 1.1 | 24199 | -- | -- |
| 242.61 | 0.727 | 14.5 | -- | -- | -- | -- | -- | 0.907 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 3 | 116.37 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 4 | 116.37 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 7 | 116.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 14 | 117.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 24 | 118.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 25 | 118.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 26 | 118.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 67 | 120.31 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 74 | 120.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 89 | 121.12 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 93 | 121.17 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 94 | 121.20 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 101 | 121.33 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 108 | 121.54 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 117 | 121.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 144 | 122.06 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 156 | 122.11 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 158 | 122.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 160 | 122.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 173 | 122.25 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 178 | 122.31 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 194 | 122.45 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 198 | 122.51 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 199 | 122.53 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 211 | 122.57 | radiation | 1.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 216 | 122.62 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 220 | 122.63 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 243 | 122.67 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 293 | 122.73 | radiation | 1.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 308 | 122.77 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 316 | 122.79 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 408 | 123.02 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 409 | 123.03 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 431 | 123.12 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 465 | 123.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 473 | 123.26 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 14 |
| 482 | 123.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 484 | 123.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 488 | 123.32 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 19 |
| 530 | 123.44 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 535 | 123.45 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 21 |
| 539 | 123.46 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 14 |
| 540 | 123.46 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 19 |
| 544 | 123.47 | temperature | 20.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 646 | 123.62 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 653 | 123.64 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 663 | 123.65 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 669 | 123.67 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 679 | 123.68 | temperature | 20.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 681 | 123.68 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 698 | 123.70 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 699 | 123.71 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 719 | 123.73 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 728 | 123.74 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 730 | 123.74 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 734 | 123.75 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 748 | 123.76 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 759 | 123.77 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 776 | 123.78 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 847 | 123.85 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 858 | 123.85 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 859 | 123.85 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 911 | 123.89 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 927 | 123.91 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 994 | 123.95 | temperature | 20.0 | 43200 | < th | dose independent | sin | 3 | NA |