Os12g0555300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Probenazole-inducible protein PBZ1.
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Os12g0555300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Probenazole-inducible protein PBZ1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.69 | 0.726 | 14.2 | 1.95 | 0.879 | 2.04 | 0.177 | 7.82 | 1.26 | 0.245 | 51.02 | 4373 | -- | -- |
| 289.56 | 0.793 | 14.1 | 1.74 | 0.976 | 1.22 | 0.255 | -- | 1.25 | 23.9 | 49.56 | 4180 | -- | -- |
| 238.5 | 0.719 | 14.2 | 1.92 | 0.861 | 2.14 | -- | 8.22 | 1.26 | 0.262 | 51.66 | 4373 | -- | -- |
| 283.78 | 0.785 | 14.2 | 1.82 | 0.932 | 1.19 | -- | -- | 1.24 | 0.327 | 49.18 | 2839 | -- | -- |
| 285.26 | 0.787 | 14.2 | 1.94 | -- | 2.46 | -- | 9.28 | 1.28 | -- | 51.85 | 4189 | -- | -- |
| 302.31 | 0.815 | 14.1 | 1.67 | 0.96 | -- | 0.254 | -- | 1.23 | 0.355 | -- | -- | -- | -- |
| 302.59 | 0.815 | 14.1 | 1.66 | 0.959 | -- | -- | -- | 1.23 | 0.334 | -- | -- | -- | -- |
| 327.14 | 0.842 | 14.2 | 1.64 | -- | 1.28 | -- | -- | 1.12 | -- | 40 | 2681 | -- | -- |
| 355.84 | 0.879 | 14.2 | -- | 0.906 | 1.09 | -- | -- | 1.08 | 0.473 | 50 | 2790 | -- | -- |
| 360.43 | 0.887 | 14.1 | 1.69 | -- | -- | -- | -- | 1.24 | -- | -- | -- | -- | -- |
| 374.84 | 0.906 | 14.2 | -- | 0.983 | -- | -- | -- | 1.04 | 0.422 | -- | -- | -- | -- |
| 397.21 | 0.928 | 14.2 | -- | -- | 1.34 | -- | -- | 0.908 | -- | 40 | 2699 | -- | -- |
| 435.58 | 0.974 | 14.2 | -- | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.80 | wind | 5.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 2 | 232.49 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 3 | 232.55 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 4 | 233.10 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 5 | 235.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 6 | 236.03 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 7 | 236.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 10 | 236.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 11 | 236.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 12 | 236.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 13 | 236.35 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 16 | 236.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 24 | 236.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 25 | 236.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 26 | 236.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 28 | 237.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 29 | 237.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 8 |
| 31 | 237.21 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 123 | 238.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 143 | 238.96 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 199 | 239.57 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 5 | NA |
| 200 | 239.59 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 234 | 240.08 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 242 | 240.22 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 249 | 240.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 251 | 240.51 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 252 | 240.51 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 15 |
| 262 | 240.57 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 286 | 240.75 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 5 | NA |
| 287 | 240.76 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 5 | NA |
| 289 | 240.76 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 5 | NA |
| 308 | 241.03 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 330 | 241.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 334 | 241.39 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 339 | 241.51 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 354 | 241.86 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 355 | 241.87 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 356 | 241.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 370 | 242.09 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 379 | 242.20 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 383 | 242.24 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 386 | 242.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 388 | 242.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 391 | 242.27 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 426 | 242.73 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 442 | 242.88 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 445 | 242.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 18 |
| 446 | 242.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 18 |
| 447 | 242.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 18 |
| 449 | 242.97 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 452 | 243.03 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 462 | 243.18 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 464 | 243.21 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 474 | 243.32 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 477 | 243.35 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 479 | 243.37 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 486 | 243.40 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 497 | 243.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 524 | 243.63 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 19 |
| 525 | 243.64 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 528 | 243.64 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 531 | 243.65 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 564 | 243.75 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 657 | 243.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 758 | 244.15 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 797 | 244.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 21 |
| 810 | 244.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 814 | 244.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 21 |
| 816 | 244.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 864 | 244.38 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 883 | 244.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 888 | 244.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 913 | 244.46 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 919 | 244.47 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 953 | 244.54 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 994 | 244.61 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 999 | 244.62 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |