Os12g0554100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0554100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF231, plant domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.77 | 0.607 | 6.46 | -3.98 | 0.547 | 3.48 | 1.32 | -2.67 | -0.531 | 3.71 | 19.27 | 922 | 16.4 | 16 |
| 171.87 | 0.611 | 6.43 | -3.4 | 0.54 | 3.49 | 0.985 | -- | -0.429 | 3.3 | 19.44 | 921 | 16.7 | 15.5 |
| 171.31 | 0.61 | 6.45 | -3.93 | 0.501 | 3.59 | -- | -2.28 | -0.519 | 3.43 | 19.33 | 932 | 16.4 | 15.6 |
| 173.6 | 0.614 | 6.4 | -3.39 | 0.478 | 3.48 | -- | -- | -0.365 | 3.3 | 19.14 | 925 | 16.6 | 15.3 |
| 174.89 | 0.616 | 6.45 | -3.87 | -- | 3.72 | -- | -1.81 | -0.481 | -- | 17.87 | 874 | 16.1 | 15.5 |
| 384.76 | 0.92 | 6.21 | -2.6 | 1.54 | -- | 1.08 | -- | 0.331 | 4.99 | -- | -- | -- | -- |
| 387.72 | 0.922 | 6.21 | -2.6 | 1.54 | -- | -- | -- | 0.326 | 5.04 | -- | -- | -- | -- |
| 176.23 | 0.618 | 6.41 | -3.47 | -- | 3.59 | -- | -- | -0.381 | -- | 17.93 | 892 | 16.1 | 15.4 |
| 443.26 | 0.981 | 6.27 | -- | 0.671 | 2.48 | -- | -- | 0.164 | 4.55 | 21.2 | 883 | 17.3 | 14.4 |
| 512.77 | 1.06 | 6.23 | -2.54 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 565.72 | 1.11 | 6.15 | -- | 1.5 | -- | -- | -- | 0.615 | 5.1 | -- | -- | -- | -- |
| 454.33 | 0.993 | 6.27 | -- | -- | 2.64 | -- | -- | 0.166 | -- | 20.76 | 821 | 17.4 | 13.7 |
| 683.37 | 1.22 | 6.17 | -- | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 18 | 181.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 20 | 181.42 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 154 | 186.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 156 | 186.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 10 |
| 162 | 186.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 163 | 186.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 10 |
| 309 | 187.37 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 310 | 187.37 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 387 | 187.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 414 | 187.79 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 475 | 187.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 486 | 188.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 508 | 188.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 599 | 188.48 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 783 | 189.17 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 784 | 189.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 822 | 189.29 | temperature | 15 | 4320 | > th | dose dependent | rect. | 6 | 1 |