Os12g0551200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0551200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.15 | 0.564 | 6.38 | 1.24 | 0.244 | -1.34 | -0.779 | -0.905 | 0.0743 | 0.573 | 22 | 792 | -- | -- |
| 146.21 | 0.563 | 6.35 | 1.52 | 0.236 | -1.33 | -1.02 | -- | 0.151 | 0.113 | 22.11 | 852 | -- | -- |
| 145.76 | 0.562 | 6.39 | 1.13 | 0.297 | -1.3 | -- | -1.19 | 0.0478 | 1.58 | 22.2 | 852 | -- | -- |
| 149.25 | 0.569 | 6.34 | 1.54 | 0.312 | -1.29 | -- | -- | 0.151 | 2.49 | 22.3 | 882 | -- | -- |
| 150.22 | 0.571 | 6.38 | 1.19 | -- | -1.28 | -- | -1.15 | 0.0457 | -- | 22.05 | 792 | -- | -- |
| 216.88 | 0.69 | 6.43 | 1.08 | 0.21 | -- | 1.42 | -- | -0.28 | 8.24 | -- | -- | -- | -- |
| 221.75 | 0.697 | 6.44 | 1.11 | 0.268 | -- | -- | -- | -0.285 | 5.96 | -- | -- | -- | -- |
| 154.39 | 0.579 | 6.35 | 1.54 | -- | -1.26 | -- | -- | 0.138 | -- | 22.15 | 838 | -- | -- |
| 206.85 | 0.67 | 6.4 | -- | 0.304 | -0.988 | -- | -- | -0.107 | 3.04 | 22.3 | 859 | -- | -- |
| 225.48 | 0.702 | 6.44 | 1.12 | -- | -- | -- | -- | -0.279 | -- | -- | -- | -- | -- |
| 254.32 | 0.746 | 6.46 | -- | 0.285 | -- | -- | -- | -0.408 | 5.77 | -- | -- | -- | -- |
| 211.68 | 0.678 | 6.4 | -- | -- | -0.955 | -- | -- | -0.109 | -- | 22.35 | 762 | -- | -- |
| 258.54 | 0.751 | 6.47 | -- | -- | -- | -- | -- | -0.403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 10 | 145.15 | temperature | 15.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 21 | 147.27 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 23 | 147.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 26 | 147.81 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 35 | 148.20 | temperature | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 48 | 148.73 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 86 | 149.54 | temperature | 30.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 97 | 149.67 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 125 | 150.10 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 159 | 150.63 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 169 | 150.72 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 173 | 150.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 181 | 150.88 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 219 | 151.52 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 270 | 152.33 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 355 | 153.44 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 364 | 153.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 423 | 154.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 443 | 154.62 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 485 | 155.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 590 | 156.06 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 601 | 156.14 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 637 | 156.41 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 773 | 157.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 794 | 157.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 795 | 157.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 804 | 157.51 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 825 | 157.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 860 | 157.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 861 | 157.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 865 | 157.87 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 874 | 157.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 913 | 158.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 920 | 158.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 925 | 158.22 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 934 | 158.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 958 | 158.43 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 990 | 158.59 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 998 | 158.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |