Os12g0550600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0550600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.21 | 0.451 | 11.3 | -1.96 | 2.09 | -0.568 | 0.291 | -0.272 | 0.301 | 17.5 | 24.99 | 270 | -- | -- |
| 92.24 | 0.447 | 11.3 | -2.02 | 2.05 | -0.58 | 0.361 | -- | 0.305 | 17.5 | 25.28 | 258 | -- | -- |
| 92.38 | 0.448 | 11.3 | -1.94 | 2.1 | -0.568 | -- | -0.376 | 0.314 | 17.5 | 25 | 275 | -- | -- |
| 92.57 | 0.448 | 11.3 | -2.04 | 2.03 | -0.613 | -- | -- | 0.29 | 17.5 | 25.3 | 273 | -- | -- |
| 211.11 | 0.677 | 11.3 | -2.5 | -- | -1.82 | -- | 0.527 | -0.0975 | -- | 25.81 | 336 | -- | -- |
| 109.08 | 0.49 | 11.2 | -1.87 | 2.48 | -- | 0.58 | -- | 0.555 | 17.4 | -- | -- | -- | -- |
| 109.91 | 0.491 | 11.2 | -1.87 | 2.48 | -- | -- | -- | 0.558 | 17.4 | -- | -- | -- | -- |
| 211.27 | 0.677 | 11.3 | -2.41 | -- | -1.79 | -- | -- | -0.082 | -- | 25.8 | 336 | -- | -- |
| 199.11 | 0.657 | 11.2 | -- | 2.22 | -0.375 | -- | -- | 0.562 | 17.4 | 25.3 | 247 | -- | -- |
| 430.38 | 0.969 | 11.2 | -1.96 | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
| 202.42 | 0.666 | 11.2 | -- | 2.51 | -- | -- | -- | 0.767 | 17.4 | -- | -- | -- | -- |
| 361.45 | 0.885 | 11.2 | -- | -- | -1.53 | -- | -- | 0.275 | -- | 25.84 | 325 | -- | -- |
| 531.45 | 1.08 | 11.1 | -- | -- | -- | -- | -- | 0.714 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 29 | 84.98 | temperature | 25.0 | 270 | < th | dose independent | rect. | 10 | 20 |
| 34 | 85.17 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 39 | 85.43 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 41 | 85.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 44 | 85.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 100 | 87.75 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 108 | 87.91 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 154 | 88.70 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 173 | 88.99 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 182 | 89.11 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 3 |
| 226 | 89.57 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 10 |
| 230 | 89.62 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 334 | 90.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 345 | 90.88 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 351 | 90.96 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 23 |
| 366 | 91.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 370 | 91.15 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 386 | 91.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 4 |
| 449 | 91.71 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 480 | 91.98 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 487 | 91.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 504 | 92.06 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 11 |
| 533 | 92.22 | temperature | 25.0 | 270 | < th | dose independent | no | NA | NA |
| 537 | 92.24 | temperature | 25.0 | 720 | < th | dose independent | rect. | 9 | 11 |
| 546 | 92.29 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 570 | 92.40 | radiation | 40.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 573 | 92.41 | temperature | 25.0 | 720 | > th | dose independent | sin | 23 | NA |
| 597 | 92.49 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 600 | 92.49 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 629 | 92.65 | temperature | 25.0 | 270 | > th | dose independent | no | NA | NA |
| 641 | 92.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 643 | 92.68 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 657 | 92.73 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 14 |
| 664 | 92.76 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 673 | 92.79 | temperature | 25.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 674 | 92.79 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 700 | 92.89 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 708 | 92.92 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 709 | 92.93 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 712 | 92.94 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 714 | 92.94 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 23 |
| 722 | 92.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 13 |
| 725 | 92.97 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 726 | 92.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 762 | 93.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 3 |
| 763 | 93.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 766 | 93.14 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 23 |
| 769 | 93.15 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 773 | 93.16 | temperature | 25.0 | 720 | < th | dose independent | sin | 23 | NA |
| 775 | 93.17 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 776 | 93.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 796 | 93.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 798 | 93.22 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 799 | 93.22 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 801 | 93.22 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 802 | 93.22 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 803 | 93.22 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 805 | 93.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 851 | 93.33 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 865 | 93.36 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 902 | 93.48 | wind | 5.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 909 | 93.50 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 917 | 93.51 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 939 | 93.58 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 943 | 93.59 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 947 | 93.60 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 954 | 93.62 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 961 | 93.63 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 964 | 93.63 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 970 | 93.64 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 983 | 93.65 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 11 |
| 985 | 93.66 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 1000 | 93.67 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 3 |