Os12g0545900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0545900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.87 | 0.398 | 5.99 | 1.94 | 0.505 | -0.691 | -0.129 | 2.24 | 0.782 | 0.0704 | 25.28 | 1291 | -- | -- |
| 74.25 | 0.401 | 6.06 | 1.5 | 0.532 | -0.46 | -0.0162 | -- | 0.695 | 0.0788 | 25.21 | 1293 | -- | -- |
| 71.92 | 0.395 | 5.99 | 1.93 | 0.511 | -0.694 | -- | 2.23 | 0.77 | 0.0257 | 25.5 | 1269 | -- | -- |
| 73.45 | 0.399 | 6.06 | 1.36 | 0.516 | -0.474 | -- | -- | 0.632 | 0.0262 | 25.46 | 1223 | -- | -- |
| 82.85 | 0.426 | 6.04 | 1.43 | -- | -0.75 | -- | 1.15 | 0.658 | -- | 25.5 | 1269 | -- | -- |
| 81.7 | 0.424 | 6.07 | 1.21 | 0.433 | -- | -0.112 | -- | 0.59 | 23.8 | -- | -- | -- | -- |
| 81.75 | 0.423 | 6.07 | 1.22 | 0.434 | -- | -- | -- | 0.59 | 23.8 | -- | -- | -- | -- |
| 83.34 | 0.427 | 6.05 | 1.32 | -- | -0.664 | -- | -- | 0.629 | -- | 25.46 | 1223 | -- | -- |
| 119.28 | 0.509 | 6.1 | -- | 0.484 | -0.207 | -- | -- | 0.462 | 0.0804 | 25.54 | 1174 | -- | -- |
| 93.6 | 0.452 | 6.06 | 1.23 | -- | -- | -- | -- | 0.596 | -- | -- | -- | -- | -- |
| 120.73 | 0.514 | 6.1 | -- | 0.449 | -- | -- | -- | 0.455 | 24 | -- | -- | -- | -- |
| 128.14 | 0.529 | 6.09 | -- | -- | -0.472 | -- | -- | 0.476 | -- | 25.46 | 1223 | -- | -- |
| 133.43 | 0.539 | 6.09 | -- | -- | -- | -- | -- | 0.46 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.66 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 17 | 68.43 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 21 | 68.50 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 22 | 68.53 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 33 | 68.80 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 43 | 68.92 | humidity | 80 | 43200 | > th | dose dependent | sin | 14 | NA |
| 73 | 69.27 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 76 | 69.29 | humidity | 90 | 43200 | < th | dose independent | sin | 12 | NA |
| 81 | 69.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 105 | 69.53 | humidity | 80 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 124 | 69.66 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 130 | 69.71 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 135 | 69.74 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 140 | 69.77 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 145 | 69.80 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 155 | 69.86 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 167 | 69.94 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 171 | 69.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 190 | 70.01 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 202 | 70.08 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 212 | 70.11 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 9 |
| 275 | 70.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 319 | 70.48 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 355 | 70.60 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 377 | 70.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 395 | 70.71 | wind | 7 | 43200 | > th | dose independent | sin | 21 | NA |
| 401 | 70.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 404 | 70.73 | wind | 7 | 43200 | < th | dose independent | sin | 21 | NA |
| 493 | 70.91 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 499 | 70.92 | humidity | 90 | 43200 | > th | dose independent | sin | 12 | NA |
| 505 | 70.92 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 506 | 70.92 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 510 | 70.93 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 514 | 70.93 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 518 | 70.94 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 14 |
| 534 | 70.97 | wind | 1 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 545 | 70.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 583 | 71.04 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 611 | 71.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 623 | 71.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 640 | 71.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 656 | 71.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 660 | 71.12 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 689 | 71.16 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 701 | 71.17 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 728 | 71.19 | humidity | 60 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 757 | 71.21 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 777 | 71.23 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 793 | 71.24 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 794 | 71.24 | humidity | 60 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 798 | 71.24 | wind | 3 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 808 | 71.26 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 818 | 71.26 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 881 | 71.32 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 958 | 71.39 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |