Os12g0536200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0536200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.2 | 0.271 | 11.1 | -0.352 | 0.396 | -1.21 | -0.306 | -0.815 | 0.167 | 23 | 11.12 | 104 | -- | -- |
| 33.64 | 0.27 | 11.1 | -0.234 | 0.402 | -1.22 | -0.158 | -- | 0.195 | 23.1 | 9.595 | 107 | -- | -- |
| 33.46 | 0.269 | 11.1 | -0.313 | 0.414 | -1.19 | -- | -0.566 | 0.171 | 23.2 | 7.509 | 125 | -- | -- |
| 33.71 | 0.27 | 11.1 | -0.231 | 0.415 | -1.19 | -- | -- | 0.193 | 23.3 | 8.565 | 122 | -- | -- |
| 39.42 | 0.294 | 11.1 | -0.234 | -- | -1.52 | -- | -0.438 | 0.229 | -- | 7.509 | 125 | -- | -- |
| 47.58 | 0.323 | 11.1 | -0.471 | 0.646 | -- | 0.187 | -- | 0.0287 | 1.18 | -- | -- | -- | -- |
| 47.71 | 0.323 | 11.1 | -0.477 | 0.646 | -- | -- | -- | 0.0279 | 1.11 | -- | -- | -- | -- |
| 39.54 | 0.294 | 11.1 | -0.175 | -- | -1.53 | -- | -- | 0.246 | -- | 13.9 | 15 | -- | -- |
| 34.94 | 0.275 | 11.1 | -- | 0.49 | -1.27 | -- | -- | 0.23 | 22.8 | 4.126 | 232 | -- | -- |
| 73.58 | 0.401 | 11.1 | -0.453 | -- | -- | -- | -- | 0.0407 | -- | -- | -- | -- | -- |
| 53.71 | 0.343 | 11.1 | -- | 0.638 | -- | -- | -- | 0.0811 | 1.08 | -- | -- | -- | -- |
| 40.25 | 0.295 | 11.1 | -- | -- | -1.59 | -- | -- | 0.272 | -- | 10.56 | 3 | -- | -- |
| 78.98 | 0.415 | 11.1 | -- | -- | -- | -- | -- | 0.0909 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 3 | 32.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 22 | 33.10 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 24 | 33.13 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 33 | 33.24 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 52 | 33.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 58 | 33.48 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 77 | 33.62 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 95 | 33.72 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 104 | 33.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 116 | 33.80 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 211 | 34.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 220 | 34.22 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 245 | 34.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 316 | 34.59 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 16 |
| 329 | 34.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 421 | 34.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 440 | 34.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 481 | 35.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 483 | 35.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 18 |
| 490 | 35.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 18 |
| 708 | 35.38 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 753 | 35.42 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 800 | 35.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |