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Os12g0533600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.23 (0.0295) R2 : 0.697
β1 : 1.11 (0.108) R2dD : 0.0731 R2D : 0.0482
β2 : 1.14 (0.0923) R2dC : 0.156 R2C : 0.383
β3 : -1.41 (0.0888) R2dE : 0.258 R2E : 0.474
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.215 (0.0632) R2dN8 : 0.0104 R2N8 : -0.0118
σ : 0.551
deviance : 139.91
__
_____
C
peak time of C : 15.8
E
wheather : wind
threshold : 4.674
memory length : 287
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 2.96
open length of G : 2.16

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
140.05 0.556 6.23 1.11 1.15 -1.41 0.0646 0.109 0.214 15.8 4.898 280 3 2.14
139.94 0.551 6.23 1.11 1.14 -1.4 -0.00487 -- 0.213 15.8 4.831 287 2.96 2.13
139.99 0.551 6.23 1.11 1.16 -1.4 -- 0.125 0.213 15.8 4.9 282 3 2.13
139.91 0.551 6.23 1.11 1.14 -1.41 -- -- 0.215 15.8 4.674 287 2.96 2.16
184.76 0.633 6.25 1.23 -- -1.86 -- -0.0105 0.136 -- 5.2 291 3.07 1.42
196.14 0.657 6.28 1.03 2.13 -- 0.502 -- 0.111 16.9 -- -- -- --
196.79 0.657 6.28 1.03 2.14 -- -- -- 0.113 16.9 -- -- -- --
180.91 0.626 6.23 1.27 -- -1.99 -- -- 0.264 -- 5.655 301 2.72 2.07
172.12 0.611 6.26 -- 1.14 -1.36 -- -- 0.094 15.9 5.252 289 2.91 2.28
437.66 0.978 6.26 0.952 -- -- -- -- 0.0578 -- -- -- -- --
224.82 0.701 6.3 -- 2.12 -- -- -- -0.0018 16.9 -- -- -- --
211.31 0.677 6.24 -- -- -1.98 -- -- 0.128 -- 6.1 314 2.37 2.48
461.57 1 6.28 -- -- -- -- -- -0.0478 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 141.05 wind 5.0 270 < th dose independent rect. 3 2
2 141.20 wind 5.0 90 < th dose independent rect. 3 5
3 142.61 precipitation 0.1 270 < th dose independent rect. 3 2
4 142.61 precipitation 0.1 270 < th dose dependent rect. 3 2
5 142.98 wind 9.0 90 < th dose dependent rect. 3 5
8 143.57 precipitation 0.1 90 < th dose independent rect. 3 5
9 143.57 precipitation 0.1 90 < th dose dependent rect. 3 5
11 144.39 radiation 1.0 270 < th dose dependent rect. 3 2
13 144.41 temperature 10.0 270 > th dose independent rect. 3 2
15 144.41 temperature 30.0 270 < th dose independent rect. 3 2
16 144.41 humidity 50.0 270 > th dose independent rect. 3 2
19 144.41 atmosphere 995.0 270 > th dose independent rect. 3 2
20 144.41 atmosphere 1010.0 270 < th dose independent rect. 3 2
22 144.41 radiation 20.0 270 < th dose independent rect. 3 2
25 144.41 temperature 10.0 270 > th dose independent rect. 5 22
26 144.47 radiation 40.0 270 < th dose dependent rect. 3 2
30 144.56 temperature 10.0 90 > th dose independent rect. 3 5
32 144.56 temperature 30.0 90 < th dose independent rect. 3 5
33 144.56 humidity 50.0 90 > th dose independent rect. 3 5
35 144.56 atmosphere 995.0 90 > th dose independent rect. 3 5
36 144.56 atmosphere 1015.0 90 < th dose independent rect. 3 5
37 144.56 temperature 10.0 90 > th dose independent rect. 8 19
40 144.68 radiation 1.0 270 < th dose independent rect. 3 2
42 144.72 wind 9.0 270 < th dose dependent rect. 3 2
43 144.90 radiation 40.0 90 < th dose independent rect. 3 5
44 145.15 wind 9.0 90 < th dose independent rect. 8 19
46 145.29 atmosphere 995.0 90 > th dose independent rect. 8 19
47 145.56 wind 9.0 270 < th dose independent rect. 5 22
48 145.64 precipitation 0.1 90 < th dose independent rect. 8 19
49 145.64 precipitation 0.1 90 < th dose dependent rect. 8 19
50 145.68 wind 5.0 270 < th dose independent rect. 1 6
54 146.16 humidity 50.0 270 > th dose dependent rect. 3 2
64 147.54 temperature 10.0 90 > th dose dependent rect. 3 5
65 147.69 atmosphere 1015.0 270 < th dose dependent rect. 3 2
85 148.48 temperature 10.0 270 > th dose independent rect. 6 20
89 148.51 precipitation 0.1 270 < th dose independent rect. 1 6
90 148.51 precipitation 0.1 270 < th dose dependent rect. 1 6
93 148.69 wind 7.0 10 < th dose dependent rect. 4 5
94 148.75 atmosphere 995.0 90 > th dose dependent rect. 8 19
97 148.79 wind 9.0 270 < th dose independent rect. 6 20
98 148.81 temperature 10.0 270 > th dose dependent rect. 3 2
99 148.85 radiation 40.0 270 < th dose dependent rect. 2 4
123 149.28 wind 9.0 270 < th dose dependent rect. 1 6
131 149.48 precipitation 0.1 270 < th dose independent rect. 5 22
132 149.48 precipitation 0.1 270 < th dose dependent rect. 5 22
141 149.67 radiation 20.0 270 < th dose independent rect. 1 6
145 149.77 humidity 70.0 270 > th dose independent rect. 1 6
146 149.80 temperature 10.0 270 > th dose independent rect. 1 6
148 149.80 temperature 30.0 270 < th dose independent rect. 1 6
149 149.80 humidity 50.0 270 > th dose independent rect. 1 6
151 149.80 atmosphere 995.0 270 > th dose independent rect. 1 6
152 149.80 atmosphere 1015.0 270 < th dose independent rect. 1 6
173 150.23 precipitation 0.1 270 < th dose independent rect. 13 17
174 150.23 precipitation 0.1 270 < th dose dependent rect. 13 17
178 150.35 precipitation 0.1 270 < th dose independent rect. 2 15
179 150.35 precipitation 0.1 270 < th dose dependent rect. 2 15
181 150.42 radiation 40.0 270 < th dose dependent rect. 1 6
186 150.49 atmosphere 995.0 270 > th dose independent rect. 5 22
188 150.49 humidity 50.0 270 > th dose dependent rect. 2 4
189 150.51 atmosphere 995.0 270 > th dose independent rect. 6 20
192 150.63 precipitation 0.1 10 < th dose independent rect. 3 6
194 150.63 precipitation 0.1 10 < th dose dependent rect. 3 6
198 150.71 wind 1.0 270 > th dose independent rect. 3 1
202 150.80 precipitation 0.1 10 < th dose independent rect. 4 4
204 150.80 precipitation 0.1 10 < th dose dependent rect. 4 4
209 150.94 precipitation 0.1 270 < th dose independent rect. 6 20
210 150.94 precipitation 0.1 270 < th dose dependent rect. 6 20
244 151.13 temperature 10.0 10 > th dose independent rect. 4 4
246 151.13 temperature 30.0 10 < th dose independent rect. 4 4
247 151.13 humidity 50.0 10 > th dose independent rect. 4 4
249 151.13 atmosphere 995.0 10 > th dose independent rect. 4 4
250 151.13 atmosphere 1015.0 10 < th dose independent rect. 4 4
251 151.13 temperature 10.0 10 > th dose independent rect. 8 20
255 151.15 precipitation 0.1 90 < th dose independent rect. 8 7
258 151.15 precipitation 0.1 90 < th dose dependent rect. 8 7
261 151.18 precipitation 0.1 270 < th dose independent rect. 6 7
262 151.18 precipitation 0.1 270 < th dose dependent rect. 6 7
264 151.19 temperature 10.0 270 > th dose independent rect. 6 7
265 151.19 atmosphere 995.0 270 > th dose independent rect. 6 7
266 151.19 atmosphere 1015.0 270 < th dose independent rect. 6 7
267 151.19 temperature 10.0 270 > th dose independent rect. 13 17
292 151.25 atmosphere 995.0 10 > th dose independent rect. 8 20
294 151.27 humidity 50.0 90 > th dose independent rect. 8 19
295 151.28 atmosphere 995.0 90 > th dose independent rect. 8 7
307 151.42 wind 9.0 270 < th dose independent rect. 6 7
320 151.49 temperature 10.0 90 > th dose independent rect. 8 7
321 151.49 atmosphere 1015.0 90 < th dose independent rect. 8 7
322 151.49 temperature 10.0 90 > th dose independent rect. 15 17
328 151.55 wind 9.0 270 < th dose independent rect. 13 17
329 151.55 atmosphere 1015.0 90 < th dose dependent rect. 3 5
341 151.67 wind 9.0 10 < th dose independent rect. 8 20
349 151.77 atmosphere 995.0 270 > th dose independent rect. 17 9
350 151.77 radiation 10.0 270 < th dose independent rect. 17 9
370 151.86 wind 9.0 270 < th dose independent rect. 17 9
373 151.89 radiation 40.0 270 < th dose dependent rect. 17 9
377 151.93 temperature 10.0 270 > th dose independent rect. 17 9
381 151.93 temperature 10.0 270 > th dose independent rect. 2 15
382 151.93 atmosphere 1015.0 270 < th dose independent rect. 2 15
392 152.00 wind 9.0 90 < th dose independent rect. 15 17
450 152.32 wind 9.0 90 < th dose independent rect. 8 7
452 152.33 radiation 40.0 90 < th dose independent rect. 15 17
458 152.40 humidity 50.0 270 > th dose independent rect. 6 7
461 152.43 precipitation 0.1 10 < th dose independent rect. 9 18
462 152.43 precipitation 0.1 10 < th dose dependent rect. 9 18
469 152.47 wind 9.0 270 < th dose independent rect. 2 15
480 152.50 temperature 10.0 270 > th dose dependent rect. 1 6
500 152.57 temperature 30.0 270 < th dose dependent rect. 3 2
511 152.69 atmosphere 995.0 90 > th dose dependent rect. 3 5
540 152.85 atmosphere 1015.0 90 < th dose independent rect. 15 17
541 152.86 temperature 10.0 10 > th dose dependent rect. 4 4
543 152.86 humidity 50.0 270 > th dose dependent rect. 1 6
583 153.18 humidity 50.0 270 > th dose independent rect. 17 9
606 153.29 radiation 1.0 90 > th dose independent rect. 8 7
620 153.45 wind 1.0 90 > th dose independent rect. 8 7
621 153.45 atmosphere 1000.0 270 > th dose independent rect. 20 15
640 153.67 precipitation 0.1 10 < th dose independent rect. 15 17
641 153.67 precipitation 0.1 10 < th dose dependent rect. 15 17
655 153.87 atmosphere 1015.0 90 < th dose independent rect. 8 19
664 153.93 temperature 10.0 10 > th dose independent rect. 8 7
666 153.93 atmosphere 995.0 10 > th dose independent rect. 8 7
667 153.93 atmosphere 1015.0 10 < th dose independent rect. 8 7
668 153.93 precipitation 0.1 10 < th dose independent rect. 8 7
669 153.93 temperature 10.0 10 > th dose independent rect. 15 17
670 153.93 precipitation 0.1 10 < th dose dependent rect. 8 7
680 154.02 precipitation 0.1 270 < th dose independent rect. 17 9
681 154.02 precipitation 0.1 270 < th dose dependent rect. 17 9
683 154.04 atmosphere 1000.0 90 > th dose independent rect. 19 8
686 154.16 wind 9.0 1440 < th dose independent rect. 4 5
687 154.16 temperature 10.0 1440 > th dose independent rect. 4 5
690 154.16 humidity 50.0 1440 > th dose independent rect. 4 5
692 154.16 atmosphere 995.0 1440 > th dose independent rect. 4 5
693 154.16 atmosphere 1015.0 1440 < th dose independent rect. 4 5
694 154.16 temperature 10.0 1440 > th dose independent rect. 9 19
701 154.23 radiation 1.0 10 > th dose independent rect. 8 7
716 154.35 precipitation 0.1 270 < th dose independent rect. 10 22
718 154.35 precipitation 0.1 270 < th dose dependent rect. 10 22
737 154.51 wind 9.0 10 < th dose independent rect. 15 17
739 154.52 atmosphere 995.0 270 > th dose dependent rect. 3 2
754 154.69 atmosphere 1015.0 10 < th dose independent rect. 15 17
758 154.72 temperature 10.0 1440 > th dose independent rect. 9 7
761 154.72 temperature 10.0 1440 > th dose independent rect. 16 17
767 154.75 atmosphere 995.0 90 > th dose independent rect. 15 17
772 154.80 radiation 1.0 270 > th dose independent rect. 6 7
774 154.81 atmosphere 995.0 90 > th dose dependent rect. 19 8
790 154.95 wind 9.0 10 < th dose independent rect. 8 7
828 155.18 humidity 50.0 90 > th dose independent rect. 8 7
858 155.28 wind 9.0 270 < th dose independent rect. 8 2
859 155.28 precipitation 0.1 270 < th dose independent rect. 8 2
860 155.28 precipitation 0.1 270 < th dose dependent rect. 8 2
861 155.32 temperature 10.0 270 > th dose independent rect. 8 2
862 155.32 atmosphere 995.0 270 > th dose independent rect. 8 2
863 155.32 atmosphere 1015.0 270 < th dose independent rect. 8 2
864 155.32 temperature 10.0 270 > th dose independent rect. 10 22
865 155.33 humidity 50.0 270 > th dose independent rect. 8 2
881 155.47 wind 1.0 90 > th dose independent rect. 8 19
904 155.64 atmosphere 1000.0 10 > th dose dependent rect. 3 5
905 155.65 radiation 40.0 10 < th dose independent rect. 15 17
933 155.84 wind 9.0 270 < th dose dependent rect. 8 2
953 155.91 atmosphere 1015.0 90 < th dose dependent rect. 15 17
954 155.92 atmosphere 1015.0 270 < th dose independent rect. 11 10
959 155.96 radiation 1.0 270 > th dose independent rect. 8 2