Os12g0532600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0532600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.8 | 0.414 | 3.44 | 0.122 | 0.224 | -0.408 | 0.172 | -0.624 | -0.0331 | 7 | 70.02 | 4244 | -- | -- |
| 78.32 | 0.412 | 3.45 | 0.0748 | 0.225 | -0.458 | 0.165 | -- | -0.0462 | 6.95 | 70.81 | 4243 | -- | -- |
| 77.88 | 0.411 | 3.44 | 0.123 | 0.225 | -0.406 | -- | -0.621 | -0.0331 | 6.88 | 70.03 | 4243 | -- | -- |
| 78.39 | 0.412 | 3.45 | 0.0834 | 0.224 | -0.46 | -- | -- | -0.0511 | 6.85 | 70.7 | 4243 | -- | -- |
| 80.51 | 0.418 | 3.45 | 0.129 | -- | -0.423 | -- | -0.635 | -0.0327 | -- | 70.39 | 4291 | -- | -- |
| 81.88 | 0.424 | 3.43 | 0.0861 | 0.231 | -- | 0.156 | -- | 0.0131 | 6.61 | -- | -- | -- | -- |
| 81.94 | 0.424 | 3.43 | 0.0883 | 0.231 | -- | -- | -- | 0.0126 | 6.54 | -- | -- | -- | -- |
| 81.03 | 0.419 | 3.45 | 0.0883 | -- | -0.468 | -- | -- | -0.0444 | -- | 70.27 | 4257 | -- | -- |
| 78.57 | 0.413 | 3.45 | -- | 0.225 | -0.462 | -- | -- | -0.0609 | 6.83 | 70.62 | 4243 | -- | -- |
| 84.72 | 0.43 | 3.44 | 0.094 | -- | -- | -- | -- | 0.0173 | -- | -- | -- | -- | -- |
| 82.14 | 0.424 | 3.44 | -- | 0.232 | -- | -- | -- | 0.00272 | 6.52 | -- | -- | -- | -- |
| 81.22 | 0.42 | 3.46 | -- | -- | -0.474 | -- | -- | -0.0584 | -- | 70.93 | 4257 | -- | -- |
| 84.96 | 0.43 | 3.44 | -- | -- | -- | -- | -- | 0.00689 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.73 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 2 | 74.12 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 3 | 74.23 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 5 | 74.29 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 7 | 74.47 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 10 | 74.49 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 36 | 75.01 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 48 | 75.62 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 49 | 75.73 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 54 | 75.81 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 73 | 76.60 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 74 | 76.63 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 81 | 76.86 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 85 | 77.11 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 86 | 77.12 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 89 | 77.12 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 98 | 77.17 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 100 | 77.18 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 101 | 77.19 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 102 | 77.21 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 103 | 77.22 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 1 | 9 |
| 114 | 77.29 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 139 | 77.40 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 140 | 77.41 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 6 |
| 144 | 77.42 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 145 | 77.42 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 176 | 77.49 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 187 | 77.49 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 193 | 77.51 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 201 | 77.55 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 221 | 77.56 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 19 |
| 227 | 77.57 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 241 | 77.58 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 267 | 77.60 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 305 | 77.63 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 309 | 77.64 | humidity | 70.0 | 4320 | > th | dose independent | sin | 3 | NA |
| 326 | 77.66 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 339 | 77.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 342 | 77.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 346 | 77.68 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 355 | 77.68 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 356 | 77.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 385 | 77.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 389 | 77.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 463 | 77.73 | humidity | 70.0 | 4320 | < th | dose independent | sin | 2 | NA |
| 465 | 77.73 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 494 | 77.75 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 516 | 77.77 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 523 | 77.77 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 544 | 77.79 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 555 | 77.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 557 | 77.80 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 559 | 77.80 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 562 | 77.80 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 563 | 77.80 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 565 | 77.80 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 570 | 77.80 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 576 | 77.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 578 | 77.80 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 579 | 77.80 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 584 | 77.80 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 589 | 77.80 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 605 | 77.82 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 625 | 77.83 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 627 | 77.83 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 23 |
| 634 | 77.84 | humidity | 70.0 | 4320 | > th | dose independent | no | NA | NA |
| 639 | 77.84 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 14 |
| 643 | 77.84 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 16 |
| 696 | 77.84 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 702 | 77.85 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 12 |
| 725 | 77.85 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 23 |
| 753 | 77.86 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 800 | 77.88 | humidity | 70.0 | 4320 | < th | dose independent | no | NA | NA |
| 885 | 77.89 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 924 | 77.90 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 966 | 77.91 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 975 | 77.92 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 980 | 77.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |